| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3265 |
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| Symbol | |
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| ID | 4253833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3897846 |
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| End bp | 3898502 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119905 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_735390 |
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| Protein GI | 113971597 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000032376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000918521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGTAT TCACCCTATT GTCATTGAGA GTCGTTATGC TACGTACTGC ATTAGTTGCG
CTGCTGCCCT TAGTATCTTC AATGTGCTTT GCTGAAACAC AGGCGGTGGA TATTTATTCT
CAAGATCAAT TACTTGAAAT GATCCGCGGC GAGAAATATC TGGCAAGAGT TAAGCAAGAT
GACTGTCAAT TAGTGCAAGA CATCGAAGCG CGCGCGGAAG TCTTAAAGCA GCCCCTGTAT
CAGTTTTTGT GGGGGGAAAT GCTCAACCAT GGTACCTGCG TAAAAGCCAA TGCAGTCAAA
GGGATGGGAT TATTGCAAGA GGCGGCCGAG CAGGGCAGTC CAGAGGCCAT GGTGAAACTT
GCCGAATATT ATCAAAGTGG TAAGTTTGTA ATTCGTAATA AAGACCGTGC GGTCAATTAT
TTATTACCAG CGGCGGCGAG CGGCAGTTTA GCCGCGCGGA TGATGTTGGT ACGTTTATAC
GGTGAAGGTT ATGGTAGTCC AAGGGATTAC GAAATGGCCT ATAACTGGTT ATACAACAAT
GTATTTACCG ATGAGGCAAC TAAGAAAAAA GCCTTGTCAT TACTGCAGGT GTTAGCCGCT
AAAATGCCCG CCAGTGCAGT GGCGCGGGCC CAGCAAGAGC ACTTGCGAAC CCGTTGA
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| Protein sequence | MQVFTLLSLR VVMLRTALVA LLPLVSSMCF AETQAVDIYS QDQLLEMIRG EKYLARVKQD
DCQLVQDIEA RAEVLKQPLY QFLWGEMLNH GTCVKANAVK GMGLLQEAAE QGSPEAMVKL
AEYYQSGKFV IRNKDRAVNY LLPAAASGSL AARMMLVRLY GEGYGSPRDY EMAYNWLYNN
VFTDEATKKK ALSLLQVLAA KMPASAVARA QQEHLRTR
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