Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3258 |
Symbol | rpsR |
ID | 4253826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3891051 |
End bp | 3891278 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638119898 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_735383 |
Protein GI | 113971590 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000185776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000962833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGTTTCA CCGCTGAAGG TGTTGCAGAA ATTGATTACA AAGATATCGT TACTTTAAAG AACTACATCA CTGAAAGCGG CAAGATCGTT CCAAGCCGTA TCACTGGTAC TAGTGCTAAA TATCAGCGTC AACTAGCTCG CGCAATCAAG CGTGCTCGTT ATCTTTCTCT ACTGCCATAC ACTGATTTAC ATCAGTAA
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Protein sequence | MARYFRRRKF CRFTAEGVAE IDYKDIVTLK NYITESGKIV PSRITGTSAK YQRQLARAIK RARYLSLLPY TDLHQ
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