Gene Shewmr4_3183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3183 
Symbol 
ID4253753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3802648 
End bp3803277 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID638119824 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_735310 
Protein GI113971517 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.413955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.024534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCT TATATGGCAC ACCACGCAGC CGAGCATTAC GAGTCTCTTG GGTGTTAGAA 
GAGTTAGGCG CCGAATGGGC CTTTTCGTTT GTGGATATGA ATAAGGGCGA GCACCGTAGC
GCCGCTTTCT TAGCGCTCAA TCCCTGCGGC AAAGTGCCAG TGTTAACCGA TGATAATCTA
GTTTTATCTG AGTCGGCGGC CATTTGCCTG TATCTGGCGG AGAAATTTGG CCAGTTGTTA
CCTGCGCCGG GCACTACTGC ATCGGGTCTG CATCATCAAT GGGTTAGCTT TATTATCACC
GAACTCGAGC AGCCACTGTG GACAATGGGC AAACATAAAT TTGCCCTCCC GGAAGCGCAG
CGTCATCCTT CTATTATGCC CTGCGCTGTG TGGGAGTTTG ATAAGGCGGC GGCCTTGGCC
GAAGCTATGC TGCCCGATAG TGACTTTTTA CTCGGCGACA CCTTGTCGGT TGCCGATATC
CTGCTTGCCC ACACCCTCAT TTGGGGCACT TTATTTGAGC AGCAGATCCC GCCTAAATTG
GCGGCGTATC GAGATAGAGT AGCGGCGCGT CCTTCGCGTA AATCGGCACT CGCTAAAATG
GAAGCCGTCG CCAACGCAGC GCAGGCTTAA
 
Protein sequence
MITLYGTPRS RALRVSWVLE ELGAEWAFSF VDMNKGEHRS AAFLALNPCG KVPVLTDDNL 
VLSESAAICL YLAEKFGQLL PAPGTTASGL HHQWVSFIIT ELEQPLWTMG KHKFALPEAQ
RHPSIMPCAV WEFDKAAALA EAMLPDSDFL LGDTLSVADI LLAHTLIWGT LFEQQIPPKL
AAYRDRVAAR PSRKSALAKM EAVANAAQA