Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3179 |
Symbol | |
ID | 4253749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3798311 |
End bp | 3800395 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119820 |
Product | endothelin-converting protein 1 |
Protein accession | YP_735306 |
Protein GI | 113971513 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3590] Predicted metalloendopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00771083 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.176468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG TACTCATTGG GGGACTGTGT GCCTCACTCA TCGCGGGCCT CACTGCCTGT AATGACAAAC CCGCTGAAGT TAAAGCGCCA GAAACCACTA AAACCGCCAC TGCTGCCGCT GTAACTAAAG CATTAGGTTC AGGTATCGAA TTTGAAAACT TCGATAAGTC TGTGCGTCCA CAGGACGACT TCTATGAATA TGTTAACGGC GCTTGGCTGA AGAAAGCCGA GATCCCAGCC GATCGCACTA GCATTGGTGC CTTCTACGAT CTGCGTGAAA AATCCCGTGA TGACGTTAAA GCCATTATCG AAGAAGTTGC TGCTACGCCA AATCTGGCCG TAGGCACTGA CGAGCAAAAA GTGGCTGATC TTTACCGTTC ATTTATGGAC ACAGCAACGC TAAACAAACT GGGCGTGACG CCACTGAAAG GCGAGTTTGA TGCCATCAAC GCCTTAAAAG ACAAAAACGA GCTGGTGAAA TACTTCGCCC ACAGTCAAAT CATGGGTGCG GGTACACCTA TCGCCTTCTA CATCGATATC GATGCGAAAA ACTCTAGCCG TTACGCGACT CACCTGTGGC AGTACGGTTT AAGCCTGCCG GAAAAAGATT ACTACTTCAA CGAAGCAGAG CGCTTCGTCA ATATCCGTAA GGCTTACCTT GCCCATATTG AAAAAATGTT CACTCTGGCC GGTCTTGCCA ATCCAAAAGC CAGCGCTGAG TCAATCCTCG CACTCGAAAC TGCGATTGCC TCTAAACATT GGGATGTGGT TGAAACACGC GACAGCACTA AGACCTACAA CCTGTACCAA GTGAAAGATC TGCCAAGCTT AGCGCCAGAT ATCGACTGGA CTGGCTACTT AACGACATTA GGTGCTGACA AGCAAACCGA CATTATCGTT AACCAACCGA GCTATATCCA AGGCCTGAAC GAAGTCCTCA AAACGACCGA TCTGGCAACT TGGAAAACCT ACATGCAATG GCAAGTGCTG ACCCATGCGG CAAGCAACTT GAGCGAAGAG TTAGACAACG AGAACTTTGC TTTCTTCTCT AAAACCCTAA ACGGTCAAGA AGAACAAGAG CCACGTTGGA AGCGCGGTGT TGCGGCAGTC AACGGCGTAT TAGGTGAAGT GGTGGGTAAA GTGTACGTGA AGCGTCACTT CGCACCAGAA GCCAAAGAGC GCATGCAAGC ATTGGTTGAA AACCTGCGCG GCGCCTACGG CGACAGCATC AAAGATCTGA CTTGGATGAG CGATACAACT AAGCAAGCTG CTGCCGAAAA ATTAGCGAAA TTCAACCCGA AAATTGGTTA TCCAAACAAG TGGGAAGATT ACAGCAAGCT GACCATTAAA GCCGATGATT TGATTGGTAA CGCGGTTCGC GCAAGCGAAG TTGAGCACGC TAAATCACTG GCTAAGTTAG GCGCGCCAAT CGATAAAGAC GAGTGGCACA TGACCCCACA AACGGTTAAC GCCTACTACA ACCCAACCAT GAACGAAATC GTGTTCCCTG CTGCAATTCT GCAACCACCT TTCTTCAACA TGGAAGCGGA TGATGCCGTC AACTACGGTG GTATCGGTGC GGTTATCGGT CACGAAATGG GCCATGGTTT CGATGACCAA GGCGCTAAGT TCGACGGCGA AGGCAATATG CGTGACTGGT GGACAGAGAA AGACTTAGAA GAATTCTCTG CCCGTGGTAA AGCGCTGATC GCACAATACG ATGGTTACTA TGTGTTTGAC GATCTGCACG TGAACGGCAG CCTGACCTTA GGCGAAAACA TCGGTGACTT ATCGGGCGTG ACTATCGCTT ACCGTGCGTA CAAAAAGTCG CTCAATGGTA AAGAAGCACC GGTTATTGAC GGTCTGACTG GCGACCAACG TTTCTTCATC GGCTTCACGC AAATTTGGCG TGCAAAAGCC AAAGAAGAAG CCCTGCGTAA CCGCGTAGCG ACAGATCCAC ACTCACCAGC AGAATTCCGA GCACTGGGCG CACTGTCTAA CATGCCTGAG TTCTACACTA CCTATGATGT GAAACCAGGT GATGCTATGT ATATCGCGCC AGAGAAACGC GTGAAAATTT GGTAA
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Protein sequence | MRKVLIGGLC ASLIAGLTAC NDKPAEVKAP ETTKTATAAA VTKALGSGIE FENFDKSVRP QDDFYEYVNG AWLKKAEIPA DRTSIGAFYD LREKSRDDVK AIIEEVAATP NLAVGTDEQK VADLYRSFMD TATLNKLGVT PLKGEFDAIN ALKDKNELVK YFAHSQIMGA GTPIAFYIDI DAKNSSRYAT HLWQYGLSLP EKDYYFNEAE RFVNIRKAYL AHIEKMFTLA GLANPKASAE SILALETAIA SKHWDVVETR DSTKTYNLYQ VKDLPSLAPD IDWTGYLTTL GADKQTDIIV NQPSYIQGLN EVLKTTDLAT WKTYMQWQVL THAASNLSEE LDNENFAFFS KTLNGQEEQE PRWKRGVAAV NGVLGEVVGK VYVKRHFAPE AKERMQALVE NLRGAYGDSI KDLTWMSDTT KQAAAEKLAK FNPKIGYPNK WEDYSKLTIK ADDLIGNAVR ASEVEHAKSL AKLGAPIDKD EWHMTPQTVN AYYNPTMNEI VFPAAILQPP FFNMEADDAV NYGGIGAVIG HEMGHGFDDQ GAKFDGEGNM RDWWTEKDLE EFSARGKALI AQYDGYYVFD DLHVNGSLTL GENIGDLSGV TIAYRAYKKS LNGKEAPVID GLTGDQRFFI GFTQIWRAKA KEEALRNRVA TDPHSPAEFR ALGALSNMPE FYTTYDVKPG DAMYIAPEKR VKIW
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