Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3164 |
Symbol | |
ID | 4253734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3783382 |
End bp | 3784629 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119805 |
Product | hypothetical protein |
Protein accession | YP_735291 |
Protein GI | 113971498 |
COG category | [S] Function unknown |
COG ID | [COG5505] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCA CGGCATTAGT CACCAATGAC GCGGTGGCGC TGGGAATATT GGCAACGATT CTGGGATTTG TGTTTTATAC CAGTAGTAGT AGCCATCCAT TTTGGCAAAA GTTTTACCGT TTTATCCCCG CGTTATTACT CTGCTATTTC TTGCCATCGT TGTTGAATAC CTTTGGGGTG ATCGATGGTG GCACATCGCA GCTTTACTAT GTGGCCTCGC GTTATCTATT GCCCGCCTGT TTGGTGCTAC TGATTTTAAG TGTGGATTTA AAAGCTATCT TAGGGCTGGG GCCTAAGGCG GTGATCATGT TTTTAACTGG GACTGTCGGC ATTGTGATCG GCGGACCGAT CGCACTGCTC GTAGTGTCCT TTATCGAACC CTCATTGATT GGTGTCGATA GTCCTGATGC TGTGTGGCGT GGCATGACGA CCCTCGCGGG GAGCTGGATT GGCGGCGGTG CCAACCAAGC CGCGATGAAA GAAATTTATG AGGTGGGCGG CAATATCTTC TCCGTGATGG TGACAGTCGA TGTGATTGTG GCCAATATTT GGATGGCGGT ATTGTTGTTT ATGGCGTCAA AAGCCAAAGA AATCGATGCC AAGACAGGTG CTGATACCAC AGCAATTGAG ACCTTAAAGA ACAAGGTTGA GCAGTATCAT GCTGAAAATG CACGTATTCC AAGCCTGCGT GATCTGATGC TGATTGTGGC CGTCGGCTTT GGCATCACTG GCGTGGCCCA TATTGCCGCC GATTTCCTCG GCCCTTATTT TGAGGCCAAC TATCCTTGGA CAGAGGATTA CAGCTTAACC TCTAAGTTCT TCTGGTTAGT GGTGATTGTG ACCACCATAG GTTTAGCCAT GTCCTTTAGC CCTATGCGCC ATTTAGAGGC GGCGGGGGCT TCTAAGGTGG CGTCGGCATT CTTGTATATT TTGGTGGCGA CCATTGGTTT ACATATGGAT GTGAGCAAGG TCCTTGATAC ACCGCTATAT TTTTTAGTGG GCATTATTTG GATGATAGTG CACGCTGGCT TTATGTTATT GATTGCTAAA TTAATTAAGG CTCCATTGTT TTATATGGCC GTGGGCAGTC AGGCAAACGT GGGAGGGGCT GCATCGGCGC CAGTTGTGGC AGCGGCGTTC CACCCAGCTT TAGCCCCTGT TGGGGTATTG TTAGCCGTAT TTGGTTATGC GCTAGGCACT TATATGGCGT GGCTCTGCGG TCAGTTACTG CAAGCCGTCG CGGTATAG
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Protein sequence | MASTALVTND AVALGILATI LGFVFYTSSS SHPFWQKFYR FIPALLLCYF LPSLLNTFGV IDGGTSQLYY VASRYLLPAC LVLLILSVDL KAILGLGPKA VIMFLTGTVG IVIGGPIALL VVSFIEPSLI GVDSPDAVWR GMTTLAGSWI GGGANQAAMK EIYEVGGNIF SVMVTVDVIV ANIWMAVLLF MASKAKEIDA KTGADTTAIE TLKNKVEQYH AENARIPSLR DLMLIVAVGF GITGVAHIAA DFLGPYFEAN YPWTEDYSLT SKFFWLVVIV TTIGLAMSFS PMRHLEAAGA SKVASAFLYI LVATIGLHMD VSKVLDTPLY FLVGIIWMIV HAGFMLLIAK LIKAPLFYMA VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVFGYALGT YMAWLCGQLL QAVAV
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