Gene Shewmr4_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3156 
Symbol 
ID4253727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3777118 
End bp3777603 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID638119798 
Productputative nucleotide-binding protein 
Protein accessionYP_735284 
Protein GI113971491 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAT TTGATATTGT GTCTGAAGTG GATGAGGTTG AATTACGTAA CGCGGTCGAA 
AACTCCCGCC GTGAACTCAG CAGCCGATTC GATTTTCGTG GTAAAGATGC CAGCATCGAA
TATAAAGATC ATGTGGTGAC TCTCACCGCG GAAGATGATT TTCAGTGTAA GCAGTTGGTC
GATATTCTGC GTACCCAATT GAGCAAGCGT AACGTTGAGC CTTCGACTAT GGATGTCGAC
GAAAAGTCGG TTCACAGTGG CAAAACCTTC TCCCTGAAAG TGCGTTTTAA GCAAGGGATC
GAGACGGATA TCGCCAAGAA AATCGTTAAG ATGGTCAAGG ATAGCAAGAT TAAAGTGCAA
TCTCAGATCC AAGGCGACAC AGTGCGTGTA ACGGGTAAAG CCCGCGATGA TTTACAAGCT
GTGATGGCGT TAGTGCGTCA AGCGGATCTG GGTCAGCCTT TCCAGTTCAA TAACTTCCGC
GATTAA
 
Protein sequence
MPSFDIVSEV DEVELRNAVE NSRRELSSRF DFRGKDASIE YKDHVVTLTA EDDFQCKQLV 
DILRTQLSKR NVEPSTMDVD EKSVHSGKTF SLKVRFKQGI ETDIAKKIVK MVKDSKIKVQ
SQIQGDTVRV TGKARDDLQA VMALVRQADL GQPFQFNNFR D