Gene Shewmr4_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3145 
Symbol 
ID4253716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3767411 
End bp3767941 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID638119787 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_735273 
Protein GI113971480 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA CCACCGAAGT GATGATCTCC GCCGAAGAGA TCAGCCAAAA ATTGGATCAA 
ATGGCCGAGC AAATCAATGC CCACTATGCC AACAGCGAAC GTTTGCTGAT GGTGGGATTG
TTAAAAGGTT CAGTCGTATT TATGGCTGAT CTGTGCCGCC GTATTAAAGG CCATGTTGAA
ATCGATTTTA TGTCGGTTTC GAGCTATGGC AATGCCATGA CCAGCTCACG GGATGTGAAA
GTGCTGAAGG ATGTGCAATC GGATATCGCG GGCCGCGACG TGCTGATTGT GGAAGACTTA
ATTGACTCGG GCAACACTTT AAACAAAGTG CGCGAAATGC TGTTATTGCG TGAGCCAAAG
AGCTTAGCCC TGTGCACTCT GTTGGATAAA CCCGAGCGCC GTGAAGTGGA TGTTAAAGTC
GATTTTATCG GTTTTACCAT TCCAGACGAG TTTATTGTGG GTTACGGCAT CGATTATGCC
GAGCAATACC GCAACTTGCC TTATATCGCC AAAGTAGTAC CGCTCGAATA G
 
Protein sequence
MKHTTEVMIS AEEISQKLDQ MAEQINAHYA NSERLLMVGL LKGSVVFMAD LCRRIKGHVE 
IDFMSVSSYG NAMTSSRDVK VLKDVQSDIA GRDVLIVEDL IDSGNTLNKV REMLLLREPK
SLALCTLLDK PERREVDVKV DFIGFTIPDE FIVGYGIDYA EQYRNLPYIA KVVPLE