Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3092 |
Symbol | |
ID | 4253663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3700483 |
End bp | 3701310 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119734 |
Product | hypothetical protein |
Protein accession | YP_735220 |
Protein GI | 113971427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00006748 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAGCA GATCTCCGTT CGAATCCTTT CAGTGGAAAA GCGATATTTT TAACTGTGAA AGCACTGATA TCGATAATTT TTATCTACAG CTTGAGCAGG AAATGTCCCG TTTGGGGATG GTTGAGAAAA AACTCGGTGA AGTCGGCAAG TACAGCGTCA GTCTGTATCA ATCTCCCGCC GCCAAATCTG GCTTACCTTC GTTATTGATC AGCGCAGGGT TTCACGGTGA AGAATCGGCA GGCCCTTGGG GCTTACTGCA CTTTTTAAGT GAAGCATCGG TCGATTTATT CGAACGGGTG AATTTGAGCA TTCTGCCTCT GGTGAACCCA ACAGGCTTTA AGCGTGGCCA TAGATTTAAT AAGTTTGGCG AAAACCCAAA CCGTGGCTTC GTGTTCGAAA ACGGTAAACC TAAGGCCAAC GAGAGCACCT CGGTGGAAGG TAAACTGCTG TTAGAACACG CACAATTACT CATTGGAGCG AGCCGTGACG GTATTTTAAC CTGCCATGAG GATGTGCTGA GCCGTGATGC TTATGTGTAT TCTTTCGAAC CAAGCCAAGT GCCGGGACGT TTTAGTCTCG ATTTACGCGA TACCTTAGGG GGTTATTTCC CTATCGCGGC CGATGGTGAT ATTGATGGTT GCCCGGTTAA AGATGGCCTC ATTTTCAACC ACTTCGATAC CTCATTTGAG GCGTGTTTAG TGCGTAGCGG CGCGCGTGTC GGTGCCTGTA CTGAAACGCC AGCACTGCAA AACTTCGACC AACGCGTCTT GGCAAATAGC GCGGCAATGA CCCATTTCTT GGCCCTTTGC GCACCATTAT GCGATTGA
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Protein sequence | MVSRSPFESF QWKSDIFNCE STDIDNFYLQ LEQEMSRLGM VEKKLGEVGK YSVSLYQSPA AKSGLPSLLI SAGFHGEESA GPWGLLHFLS EASVDLFERV NLSILPLVNP TGFKRGHRFN KFGENPNRGF VFENGKPKAN ESTSVEGKLL LEHAQLLIGA SRDGILTCHE DVLSRDAYVY SFEPSQVPGR FSLDLRDTLG GYFPIAADGD IDGCPVKDGL IFNHFDTSFE ACLVRSGARV GACTETPALQ NFDQRVLANS AAMTHFLALC APLCD
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