Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3080 |
Symbol | |
ID | 4253651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3682947 |
End bp | 3684761 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119722 |
Product | sulfite reductase (NADPH) alpha subunit |
Protein accession | YP_735208 |
Protein GI | 113971415 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.274835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTAA AAGAACTTTC ATCACTGGCT TCACCCCTGT CGCAACCGCA GGTCGAAAAG CTGAAACAAC TCACCGCTGA ATTAAATGCC GTGCAACTTG CTTGGGTGAG CGGTTATTTA GCCGCAACGG CCAATGCGTC GGGCAATCTG GCCCAGCTTG CGCCCGTGTC CGATGCTCAG GCGGCGCAGA CAGTGACCAT TCTCTATGGC AGCCAAACCG GCAATGGCCG TGGTATTGCC AAAGCCTTGG CCGAGAAGGC AAAAGCGCAG GGCTATAGTG TGAATCTAGC TTCTATGGGT GAATACAATG TGCGTCAGCT TAAGCAAGAA ACCTTGTTAT TGCTGGTGGT CAGTACCCAT GGTGAGGGTG AAGCGCCGGA TGATGCGATT GAATTACATA AGTTTTTAGC ATCGAAACGC GCACCTCAAT TAAACAACTT ACATTACTCT GTGTTGGCGC TGGGCGATTC AAGCTATGAG TTTTTCTGCC AGACAGGTAA AGACTTCGAT GCCCGTCTTT CGGCATTAGG CGCCAAAGCG CTGCTGCCTC TGGTTGAGTG TGATGTGGAC TATGAGGCTG CGGCCGGACA GTGGCACGCC GATGTACTCT CCGCCGTGAA GCCACTCATT CAAACCACGG CTAACGTGGT GGCGCTCAAT GATACCAGCT CGGCACTCGC TGCCAGCGAG AGCGAATTTA CTAAGCAAAA CCCTTACAGT GCAGAAGTGT TGGTGAGCCA GAAGATCACT GGACGTGGTT CAGACCGAGA CGTGCGCCAC GTTGAAATCG ATTTAGGCGA GTCAGGCTTA CGCTATGAAG TCGGTGATGC CCTTGGAGTA TGGTTTAGCA ACAATGAAAC TTTGGTTGAT GAGATTTTAG CGGGCTTAGG GTTAGCCGCC GATACTAAGG TGACTGTCGC TAATGAATCC ATCAGCCTCA AACAAGCCTT AATCGAGAAG AAAGAGCTGA CACAGTTATA TCCTGGTTTA GTCAAAGCCT GGGCCGAGTT GTCCGCAAGC CCAGAGCTGC TTGCCCTGAG CGAAGATAAA GAACAGGTTC GCCAGTTTAT CTTACATCAT CAATTTGCAG ACTTAGTGGC GAACTATCAG CTCAAGGCCG ATGCTAATCT CGATGCAAAC AAGTTAGTGG AATTATTACG CCCATTAACG CCAAGACTCT ACTCCATCGC CTCGAGCCAG AGTGAAGTCG ATACCGAAGT GCATCTCACC GTGGCTTTGG TAGAAGATGA GCACCAAGGA CAAGCCCGTT TTGGCGGTGC ATCGCATTTC TTAGCCTCGG CAGAGGAAGG CGCCGAAGTA AAAGTGTATG TTGAACCGAA CAAGCATTTC CGTTTACCTG AAGATCCACA AACGCCAGTC ATCATGATTG GCCCTGGCAC AGGGGTTGCG CCGTTTCGCG CCTTTATGCA GGAACGCGTG GCACAAGGCG CTGAGGGCGA TAGCTGGTTA TTCTTCGGTA ATCCTCATTT TGAGCAGGAC TTCCTGTATC AAACCGAGTG GCAACAGTAT CTGAAAAACG GCGATTTAAC CCGTATCGAT GTGGCATTTT CGCGGGATCA GGCCCATAAA ATTTACGTGC AGCACCGCAT TAAAGAGCAG GGACAAACCC TGTGGCAATG GCTGCAAAAT GGCGCACATC TCTATATTTG TGGTGATGCC GAACGTATGG CTAAAGACGT ACACCAAGCC CTATTAGGGG TTGCGGTGGA GTTTGGCGGA CTGTCGAGCG AGGCGGCGGA AGAATATTTC GAGACCCTGC GCAGTCATAA ACGTTACCAA AAAGACGTGT ACTAA
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Protein sequence | MLLKELSSLA SPLSQPQVEK LKQLTAELNA VQLAWVSGYL AATANASGNL AQLAPVSDAQ AAQTVTILYG SQTGNGRGIA KALAEKAKAQ GYSVNLASMG EYNVRQLKQE TLLLLVVSTH GEGEAPDDAI ELHKFLASKR APQLNNLHYS VLALGDSSYE FFCQTGKDFD ARLSALGAKA LLPLVECDVD YEAAAGQWHA DVLSAVKPLI QTTANVVALN DTSSALAASE SEFTKQNPYS AEVLVSQKIT GRGSDRDVRH VEIDLGESGL RYEVGDALGV WFSNNETLVD EILAGLGLAA DTKVTVANES ISLKQALIEK KELTQLYPGL VKAWAELSAS PELLALSEDK EQVRQFILHH QFADLVANYQ LKADANLDAN KLVELLRPLT PRLYSIASSQ SEVDTEVHLT VALVEDEHQG QARFGGASHF LASAEEGAEV KVYVEPNKHF RLPEDPQTPV IMIGPGTGVA PFRAFMQERV AQGAEGDSWL FFGNPHFEQD FLYQTEWQQY LKNGDLTRID VAFSRDQAHK IYVQHRIKEQ GQTLWQWLQN GAHLYICGDA ERMAKDVHQA LLGVAVEFGG LSSEAAEEYF ETLRSHKRYQ KDVY
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