| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3031 |
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| Symbol | |
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| ID | 4253602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3624777 |
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| End bp | 3625214 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119673 |
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| Product | hypothetical protein |
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| Protein accession | YP_735159 |
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| Protein GI | 113971366 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.499419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATTT GGTTTAGACC TGTCACCTTA GAGGATTGTG CGCGTTTAGA TGCTGGCATG
GGGGGCAAAG GCACCTTGAT GCAGACCCTA GGGATTGAGA TCAGTGAGAT TGGTGATGAC
TACATGAAGG CAACTATGCC TGCCACGCCA GCCGTACATA ATCCCTTAGG CATTGTCCAT
GGCGGTGCGA ACGTGGCGCT GGCCGAAACT GTGGCCAGTT ATGCCGCAAA CTTTGCGGTG
GATTTTGAGC AATATTATTG TGTTGGACAA GAGATTAACG CTAACCATTT ACGCGCTTCG
CGTAATGGCG TACTGACCGC GACGGCAAAA CCCATTCATT TGGGGAAGCG CAGTTCGGTG
TGGGAAATCT TAATCCATAA TAGTGCAGGG GAGCTGACCT GTATTTCACG GATGACGGCG
GCAGTCGTTA AACGCTAA
|
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| Protein sequence | MSIWFRPVTL EDCARLDAGM GGKGTLMQTL GIEISEIGDD YMKATMPATP AVHNPLGIVH
GGANVALAET VASYAANFAV DFEQYYCVGQ EINANHLRAS RNGVLTATAK PIHLGKRSSV
WEILIHNSAG ELTCISRMTA AVVKR
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