Gene Shewmr4_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3014 
Symbol 
ID4253585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3599848 
End bp3600717 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content52% 
IMG OID638119656 
Productsulfate ABC transporter, inner membrane subunit CysW 
Protein accessionYP_735142 
Protein GI113971349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0486489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAT TTAAACCGTT AAGAGTCGGT GAAGCGCCCC TCATCAAATG GAGCCTAATC 
ATCCTAGCCG TGTTTTTGGC CATGGTGTTG TTGCTGCTGC CCTTAGTCAG TATTTTCCAG
CAGGCCTTCG TTGGTGGTTG GGAGCGTTAT ATCGAGCATC TGAGCCAACC CGACTCACTC
CACGCCATCG GGCTGACCCT GATGGTCGCA GCGCTAACCG TGCCGATTAA CTTAGTGTTT
GGGGTACTGC TCGCCTGGAG CGTAACGCGC TTTGAGTTTC CGGGGCGTAA GTTACTCATT
ACCTTGATTG ATATTCCCTT TGCCGTATCG CCCGTGGTCG CAGGCTTGCT CTATCTACTG
CTTTACGGCA ACAGTGGCTG GCTCGGTGCT TGGCTGTTTG AGCACGATTT ACAGATCATG
TTTGCCTGGC CGGGGATTCT GTTAGTCACC ATTTTCGTGA CCTGCCCCTT TGTTGCCCGA
GAATTAATCC CCTTGATGCA GCAACAGGGC GCATCGGAGG AGGAAGCCGC AGTCATTCTT
GGTGCCTCAT GGTGGCAACT GTTTCGCCGC GTGACTCTGC CCAATATCAA GTGGGCACTG
ATTTATGGGG TGATCCTCAC CAACGCCAGA GCCGTAGGTG AGTTTGGTGC TGTTGCCGTA
GTATCTGGCA ATATCCGTGG CGAAACCAAC ACCTTACCTT TGCATGTGCA ATTACTTTAC
GAAGATTATC AGGCCGAAGC CGCCTTCGCG AGCGCGTCAC TGCTTGCCTT AATCGCCCTA
TGTACCTTAC TGCTAAAAGC CTTAGTAGAG TGGCGCCAAC AACGCAGCTT ATCCGCCAAT
GACAACCAAG AGCAGAGCCA ATCATTATGA
 
Protein sequence
MNSFKPLRVG EAPLIKWSLI ILAVFLAMVL LLLPLVSIFQ QAFVGGWERY IEHLSQPDSL 
HAIGLTLMVA ALTVPINLVF GVLLAWSVTR FEFPGRKLLI TLIDIPFAVS PVVAGLLYLL
LYGNSGWLGA WLFEHDLQIM FAWPGILLVT IFVTCPFVAR ELIPLMQQQG ASEEEAAVIL
GASWWQLFRR VTLPNIKWAL IYGVILTNAR AVGEFGAVAV VSGNIRGETN TLPLHVQLLY
EDYQAEAAFA SASLLALIAL CTLLLKALVE WRQQRSLSAN DNQEQSQSL