Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3014 |
Symbol | |
ID | 4253585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3599848 |
End bp | 3600717 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119656 |
Product | sulfate ABC transporter, inner membrane subunit CysW |
Protein accession | YP_735142 |
Protein GI | 113971349 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4208] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein [TIGR02140] sulfate ABC transporter, permease protein CysW |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0486489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAT TTAAACCGTT AAGAGTCGGT GAAGCGCCCC TCATCAAATG GAGCCTAATC ATCCTAGCCG TGTTTTTGGC CATGGTGTTG TTGCTGCTGC CCTTAGTCAG TATTTTCCAG CAGGCCTTCG TTGGTGGTTG GGAGCGTTAT ATCGAGCATC TGAGCCAACC CGACTCACTC CACGCCATCG GGCTGACCCT GATGGTCGCA GCGCTAACCG TGCCGATTAA CTTAGTGTTT GGGGTACTGC TCGCCTGGAG CGTAACGCGC TTTGAGTTTC CGGGGCGTAA GTTACTCATT ACCTTGATTG ATATTCCCTT TGCCGTATCG CCCGTGGTCG CAGGCTTGCT CTATCTACTG CTTTACGGCA ACAGTGGCTG GCTCGGTGCT TGGCTGTTTG AGCACGATTT ACAGATCATG TTTGCCTGGC CGGGGATTCT GTTAGTCACC ATTTTCGTGA CCTGCCCCTT TGTTGCCCGA GAATTAATCC CCTTGATGCA GCAACAGGGC GCATCGGAGG AGGAAGCCGC AGTCATTCTT GGTGCCTCAT GGTGGCAACT GTTTCGCCGC GTGACTCTGC CCAATATCAA GTGGGCACTG ATTTATGGGG TGATCCTCAC CAACGCCAGA GCCGTAGGTG AGTTTGGTGC TGTTGCCGTA GTATCTGGCA ATATCCGTGG CGAAACCAAC ACCTTACCTT TGCATGTGCA ATTACTTTAC GAAGATTATC AGGCCGAAGC CGCCTTCGCG AGCGCGTCAC TGCTTGCCTT AATCGCCCTA TGTACCTTAC TGCTAAAAGC CTTAGTAGAG TGGCGCCAAC AACGCAGCTT ATCCGCCAAT GACAACCAAG AGCAGAGCCA ATCATTATGA
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Protein sequence | MNSFKPLRVG EAPLIKWSLI ILAVFLAMVL LLLPLVSIFQ QAFVGGWERY IEHLSQPDSL HAIGLTLMVA ALTVPINLVF GVLLAWSVTR FEFPGRKLLI TLIDIPFAVS PVVAGLLYLL LYGNSGWLGA WLFEHDLQIM FAWPGILLVT IFVTCPFVAR ELIPLMQQQG ASEEEAAVIL GASWWQLFRR VTLPNIKWAL IYGVILTNAR AVGEFGAVAV VSGNIRGETN TLPLHVQLLY EDYQAEAAFA SASLLALIAL CTLLLKALVE WRQQRSLSAN DNQEQSQSL
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