Gene Shewmr4_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3005 
Symbol 
ID4253576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3592482 
End bp3592874 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content46% 
IMG OID638119647 
Producthypothetical protein 
Protein accessionYP_735133 
Protein GI113971340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000109936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.100935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGCT TGTTGGGCCT AAGCGTGAGC TTGATGGGGC CAGCGAATGT ACTTGCCGCA 
CCGGATGAAG AGTCAAAGTT AAAACTGACC CCCGAAATCT GTATCACTGG GGATGAAAGC
CAAGCCTGCG AGATCCGTGT CGAGTTACAG TGGCAACTCG CCAATGACGA GCTGGTCTGT
ATCTTGTCCG ATAATAATGC CTATCCTAAA TGGTGTAGCG AATCACTGGA ACAGCATAAA
ATCACGCTGA ATATCAGCAC ATTAAACGAT ATTCAATTTA TCTTAGTGAG TAAGGACACC
AATCTAACAC TGGCTGGAGC CAAATTAAAA ATTACGTCAA CCTCGCAGCC TCAGGTGCGC
AGACGTTACC GTAACCCTTG GAGTTTATTT TAA
 
Protein sequence
MLCLLGLSVS LMGPANVLAA PDEESKLKLT PEICITGDES QACEIRVELQ WQLANDELVC 
ILSDNNAYPK WCSESLEQHK ITLNISTLND IQFILVSKDT NLTLAGAKLK ITSTSQPQVR
RRYRNPWSLF