Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3005 |
Symbol | |
ID | 4253576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3592482 |
End bp | 3592874 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119647 |
Product | hypothetical protein |
Protein accession | YP_735133 |
Protein GI | 113971340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000109936 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.100935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTGCT TGTTGGGCCT AAGCGTGAGC TTGATGGGGC CAGCGAATGT ACTTGCCGCA CCGGATGAAG AGTCAAAGTT AAAACTGACC CCCGAAATCT GTATCACTGG GGATGAAAGC CAAGCCTGCG AGATCCGTGT CGAGTTACAG TGGCAACTCG CCAATGACGA GCTGGTCTGT ATCTTGTCCG ATAATAATGC CTATCCTAAA TGGTGTAGCG AATCACTGGA ACAGCATAAA ATCACGCTGA ATATCAGCAC ATTAAACGAT ATTCAATTTA TCTTAGTGAG TAAGGACACC AATCTAACAC TGGCTGGAGC CAAATTAAAA ATTACGTCAA CCTCGCAGCC TCAGGTGCGC AGACGTTACC GTAACCCTTG GAGTTTATTT TAA
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Protein sequence | MLCLLGLSVS LMGPANVLAA PDEESKLKLT PEICITGDES QACEIRVELQ WQLANDELVC ILSDNNAYPK WCSESLEQHK ITLNISTLND IQFILVSKDT NLTLAGAKLK ITSTSQPQVR RRYRNPWSLF
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