Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2994 |
Symbol | |
ID | 4253565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3581745 |
End bp | 3582593 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638119633 |
Product | putative lipoprotein |
Protein accession | YP_735122 |
Protein GI | 113971329 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000158327 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.33203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTATCTG TTACAATCGA ATGCTTTCTA TTTTATCGTG AAATGGAAAA ATTCTTAACT ACAACTTATA AAGAATTGAA TTCAAGTATG TATAAATTCT CCAAAGGCTT AACCTTAGTC CTATTTTCGC TAGCGTTATC AGCCTGTAGT AGCAGTCCTG AAGATAACGA TATTGCCGCC AAAACCTCAC CTGATGTGCT CTATTCTCAG GCAAGAACCT CCATGGAACT TGGCAATTAC TCTAAAGCCG TCCGTTCATT GGAAGCGTTA GACTCACGCT TCCCCTTCGG ACCACATAAA ACTCAGGTTC AATTGGATCT GATTTATGCC TATTACAAAA TGGATGATGT TGCCTCTGGC ATTGCCAACA TTGACAGATT CATCCGCTTA AACCCCACTC ACCCTGATAT CGATTATGTC TACTATATGC GTGGACTCGT CAATATGCAG GCGGACAGCT ATCTGTTCCA CGATATGTTA AATATCGATA GAACCGACCG CGATCCTAAA AATGCCCAAG ATGCCTTTAA GGATTTTGAT CGTTTAATCA AAACCTATCC CAACAGCAAG TATGCTGCCG ATGCACAAAA ACGCATGTTG TCGCTGAAAA ACCGTTTAGC AAAATATTCC ATTCAAGTTG CTGAGTATTA CCTCAAAATG AATGCTTGGA GTGCTGCGGC CGTTCGTGCT CAATCTGTGT TGGAAACATA TCCCGGCACC CCTTCAACGG AGCGGGCACT GGAGATTATG GCAGAAGCTT ATGGCGAGTT AGGTCAGAAC CAACTGAAGC AAAACGTGCT CATGGTAATG CAAGCTAACT TCCCAAACAA CGAAATCTTA TCGAACTAA
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Protein sequence | MLSVTIECFL FYREMEKFLT TTYKELNSSM YKFSKGLTLV LFSLALSACS SSPEDNDIAA KTSPDVLYSQ ARTSMELGNY SKAVRSLEAL DSRFPFGPHK TQVQLDLIYA YYKMDDVASG IANIDRFIRL NPTHPDIDYV YYMRGLVNMQ ADSYLFHDML NIDRTDRDPK NAQDAFKDFD RLIKTYPNSK YAADAQKRML SLKNRLAKYS IQVAEYYLKM NAWSAAAVRA QSVLETYPGT PSTERALEIM AEAYGELGQN QLKQNVLMVM QANFPNNEIL SN
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