| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2991 |
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| Symbol | |
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| ID | 4253562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3577254 |
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| End bp | 3579827 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119630 |
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| Product | ATPase |
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| Protein accession | YP_735119 |
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| Protein GI | 113971326 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00302942 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.61786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAGCTTGCCA TCTCAGATGC CCAGTCGCTC
GCGCTCGGGC GTGATCATCA GTTTATCGAA CCGTTACATT TGATGATGGC GCTGCTGAAC
CAGGATTCTG GTTCTATCCA TCCTTTATTA ACCCAAGCTG GCATTCGGGT GAGTGCGCTG
CGCTCGCTGT TGAGCCAAGA GCTTGAACGT CTCCCGCAGG TCGAAGGCAC TGGTGGCGAT
GTACAATTAT CCCAAGGTTT AATTCGCCTA TTAAACCTGT GCGACAAGTT GGCGCAAAAG
CGCAAAGACA AATATATCTC CAGTGAGTTG TTTGTCTTAG CGGCACTCGA AGGCAGCGAT
GCCTTGGCGC AATGCTTAAA GAAATCAGGC GCCACCAAAG AGCTGCTCGA GCAAACCATT
GAGCAAGTGC GCGGCGGTCA GAATGTGGAT GATCCTAACG CGGAAGATCA ACGCCAAGCG
CTGAAAAAGT TTACCGTCGA TCTCACTGAG CGTGCCGAGC AAGGCAAACT TGACCCTGTG
ATTGGTCGCG ACGATGAAAT CCGTCGCACC ATTCAAGTGC TGCAACGCCG TAGTAAAAAC
AACCCTGTGC TGATTGGTGA GCCTGGCGTG GGTAAAACCG CGATTGTTGA AGGCCTCGCG
CAGCGAATTG TGAACGGTGA AGTGCCTGAA GGGATTAAAA ATAAACGCGT TTTATCCTTA
GACATGGGCG CACTGATTGC GGGCGCTAAA TATCGTGGCG AGTTTGAAGA GCGTTTAAAA
GCCGTGCTTA ACGAGCTGGC GCAGGAAGAA GGCCAAGTGA TCCTCTTTAT CGACGAGCTG
CACACTATGG TGGGCGCGGG TAAAGGCGAT GGCGCCATGG ATGCGGGCAA TATGTTAAAG
CCTGCACTGG CCCGTGGCGA TCTTCACTGT GTGGGCGCGA CCACTCTGGA CGAATATCGT
CAATATATTG AAAAGGATGC CGCCCTTGAG CGCCGCTTCC AAAAAGTATT AGTGGATGAG
CCTAGCGTTG AAGATACCAT CGCGATTTTG CGTGGTCTCA AAGAGCGTTA CGAGCTGCAT
CACCATGTGG AAATTACCGA TCCGGCGATT GTGGCGGCGG CCACCATGTC GCACCGCTAT
GTGTCGGACC GTAAATTACC CGATAAAGCC ATCGACTTGA TTGATGAGGC GGCGTCGAGC
ATCCGTATGC AGATGGATTC TAAGCCTGAA TCCCTAGACA GATTGGAGCG CCGTGCAATC
CAGTTGAAAC TGGAAGAGCA GGCATTAGCA AAAGAAAACG ATGAGGCGAG CCGCCGTCGA
CTCGAACATT TACGTGTCGA GTTGCATGAA GTTGAGGCTA AGGCGTCGGA GCTTAATGAA
ATCTGGCGCA CCGAAAAAGC GGCGCTTGCA GGGACTCAGC ATATTAAAGC CGACCTTGAG
CAGGCGCGGA TGGATTTAGA GGTGGCGCGC CGCGCGGGCG ACTTGACCCG TATGTCCGAG
CTGCAATATG GCCGTATTCC CGAGCTTGAA AAGCAACTGG ACTTAGCTTC GCAAGCCGAG
ATGCAGGACA TGACGCTGCT ACGCAATAAA GTTACTGACT TAGAAATTGC CGAAGTGTTA
TCAAAGGCGA CGGGCATTCC GGTTTCTAAG ATGCTTGAAG GCGAGCGTGA AAAGCTGCTG
CAAATGGAAG TGGCACTGCA TGAGCGGGTG ATTGGCCAAA ACGAAGCCGT GGATGCGGTG
GCCAATGCGA TTCGCCGTAG CCGCGCAGGA CTTGCCGACC CGAATCGTCC TATTGGTTCG
TTCCTGTTCT TAGGACCAAC CGGTGTGGGT AAAACTGAGT TGTGTAAGTC GTTGGCTAAG
TTCCTCTTCG ATACGGAATC GGCCTTAGTG CGCATCGACA TGTCTGAATT TATGGAGAAA
CACGCGGTTT CCCGTTTAGT GGGGGCGCCT CCAGGCTATG TCGGCTATGA AGAGGGCGGT
TACTTAACCG AAGCGGTACG CCGTAAGCCT TATTCGGTGA TATTGCTCGA TGAGGTGGAA
AAGGCTCACC CAGACGTGTT CAACATTTTA CTGCAGGTGT TAGACGATGG CCGCTTAACC
GATGGTCAAG GCCGTACCGT CGACTTTAGA AATACGGTGA TCATCATGAC CTCAAACTTA
GGCTCTGACA TTATCCAAGA AGGATTCGGT CACCTAAGTT ATAGCGAAAT GAAGAGCGCG
GTGATGAATG TGGTTACCCA TAGCTTTAGA CCCGAGTTTC TAAACCGGAT CGACGAGTCA
GTGGTATTCC ATCCCTTGGA TGCGGAAAAT ATCAAGCATA TTGCATCTAT CCAAATTGCT
TCATTACGTA AGCGTTTGGC AGAGAAAGAC TATACGCTGG AGATCACCGA CGAGGCATTA
TCGTTAATCG CCGAAATTGG TTTCGACCCA GTCTATGGCG CAAGACCGCT GAAACGTGCC
TTGCAGCAAG AGATGGAAAA CCCATTAGCG CAAAAATTAC TGCGTGGCGA TTTACTGCCC
GGCAAACCTA TTAAGGTCAG TTGCGCCGGT GGTGAGTTGG TATTCGAGCA ATAA
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| Protein sequence | MRLDRMTNKF QLAISDAQSL ALGRDHQFIE PLHLMMALLN QDSGSIHPLL TQAGIRVSAL
RSLLSQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FVLAALEGSD
ALAQCLKKSG ATKELLEQTI EQVRGGQNVD DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL
DMGALIAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKGD GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH
HHVEITDPAI VAAATMSHRY VSDRKLPDKA IDLIDEAASS IRMQMDSKPE SLDRLERRAI
QLKLEEQALA KENDEASRRR LEHLRVELHE VEAKASELNE IWRTEKAALA GTQHIKADLE
QARMDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTDLEIAEVL
SKATGIPVSK MLEGEREKLL QMEVALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTESALV RIDMSEFMEK HAVSRLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL
GSDIIQEGFG HLSYSEMKSA VMNVVTHSFR PEFLNRIDES VVFHPLDAEN IKHIASIQIA
SLRKRLAEKD YTLEITDEAL SLIAEIGFDP VYGARPLKRA LQQEMENPLA QKLLRGDLLP
GKPIKVSCAG GELVFEQ
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