| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2957 |
|---|
| Symbol | ileS |
|---|
| ID | 4253528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3530591 |
|---|
| End bp | 3533413 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638119593 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_735085 |
|---|
| Protein GI | 113971292 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000139756 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.394087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT ATAAATTTAC TTTGAATTTG CCGGAAACTG AGTTTCCGAT GCGTGGTAAT
TTGGCAAATC GCGAGCCAGA GATGTTAGAG CGCTGGACGA AAGACGGTCT GTATCAGCAG
ATCCGTGATA GCCGAATTGG CCGCACACCT TTTATTTTGC ATGACGGCCC ACCGTATGCG
AACGGCAGCA TTCATATTGG TCACTCAGTC AACAAAATTC TTAAGGACAT TATTGTTAAG
TCAAAAACCA TGTCAGGTTT TGACGCGCCT TATGTGCCTG GTTGGGATTG CCACGGTCTG
CCAATTGAAC TGAAAGTTGA GCAAAAAGTC GGTAAGCCTG GTCAAAAAAT TTCAGCGGCC
GAATTCCGTG AGGAATGCCG TAAATATGCT GCCGAGCAAG TCGATGGCCA ACGTGCTGAC
TTTATTCGTT TAGGCGTGCT GGGTGATTGG CAAAAGCCTT ATTTAACGAT GGACTTTGCT
ACCGAAGCCA ATATCGTACG CTCTTTATCT AAAGTGATTG AAAACGGTCA CTTACATAAA
GGTGTTAAAC CTGTTCATTG GTGTACAGAC TGTGGTTCTG CATTGGCTGA AGCCGAGGTG
GAATACGAGG ATAAAACCTC TCCCGCTATC GATGTGGCCT TTACTGCGAC TGACAGCAAA
GCCGTTGCCG CTCAATTTGG TGTAAGCGAT TACTCACATC CTGTCGCTAT GGTGATTTGG
ACTACCACTC CTTGGACGCT GCCTGCTAAC CGTGCGTTAT CTATCAGCCC AGAGCTTGAT
TACAGCTTGG TTGAATTTGC GAAAGAGGGC GCGACTCACG CAGTTATTCT GGCCGACGTG
TTAGTTGAAG CTTGCATGAC GCGTTACGGC GCCGAGAGCC ACAACGTGTT AGGTAAAGTT
AAAGGCGCAG CACTTGAGCT GGTTCGCTTT AAACATCCAT TCTTAGCCTT TGACGTACCT
GCGATTTTAG GCGACCACGT GACGACTGAC GCGGGTACGG GTGTGGTTCA CACGGCACCT
GGCCATGGTC AAGACGACTT CGTGGTTGGT CAAAAATACG GCTTAGAAGT GGCCAACCCT
GTTGGCGATA ACGGCGTTTA CAAACCAGAC ACTGAGTTTT TTGCCGGTCA ACACGTATTT
AAAGCAAACG ACAATGTGGT TGCACTGCTG AAAGAAAAAG GCGCGCTATT ACACCATGTT
GCGTACCGTC ACAGCTATCC ACACTGCTGG CGCCATAAAA CGCCTATTAT CTTCCGTGCT
ACGCCGCAAT GGTTTATCTC AATGGATAAC CAAAACCTGC GCAAGCAAGC ATTAAGCGAA
ATTGAGCAGA CTCAGTGGAT CCCTGACTGG GGCCAAAGCC GTATCGAGAA GATGGTTGAG
AATCGTCCTG ATTGGTGTAT CTCCCGTCAA CGTACTTGGG GCGTGCCAAT TACCTTATTC
GTACACCGCG AAACTGAAGA GCTGCACCCT GACAGCGTGT CGTTAATGGC ACGTGTGGCC
AACCGCATTG AGCAAGAAGG CATTCAAGCT TGGTGGGATC TCGATGCTGC CGAATTACTG
GGTGAAGAAG CAGAACAATA CCGCAAAGTG ACCGATACCT TAGACGTATG GTACGACTCA
GGTTCAACCT TTGCTTCTGT GGTAGGCGCG CGCCCAGAGT TTCATGGTCA TGGTGTCGAT
TTATACCTTG AAGGTAGCGA TCAACACCGT GGTTGGTTTA TGTCGTCATT GATGATTTCT
ACTGCTATGA CTGGCAAAGC ACCTTACAAG CAAGTGCTGA CCCACGGCTT TACCGTTGAT
GGTAAAGGTC GCAAGATGTC GAAATCTATC GGTAACGTTA TTGCGCCTCA GCAAGTGACT
AACAAGCTAG GTGCGGATAT TCTGCGTCTT TGGGTTGCTG CAACCGACTA CAGCGGTGAA
ATGACAGTAT CGGATGAAAT CTTAAACCGT AGCGCCGATG CTTATCGCCG TATTCGTAAC
ACCGCTCGTT TCTTACTGGC GAATCTTAAT GGCTTCGACC CAGCTAAGGA CTTAGTGGCT
GTAGAAGATA TGGTGGCGTT AGACCGCTGG GCGGTGCGCC GCGCAGCAGC GCTGCAGCAA
GAAATCATTG AAGCTTATGA GCAATATAAC TTCCATATTG TGACGCAAAA GCTGATGCAG
TTCTGCTCGG TTGAGCTAGG TAGCTTCTAC TTAGACATCA TCAAAGACCG TCAATATACC
GCTAAGCAAG AGGGCCATGC CCGCCGTAGC TGCCAATCTG CACTGTTCCA CATTGCTGAG
GCTATGGTGC GTTGGATTGC GCCAATCCTG AGCTTTACTG CCGACGAAGT GTGGCAATTA
CTGCCTGGTC AACGTAATGC TTACGTGTTT ACCCAAGAAT GGTACCAAGA TCTGCAATCT
ATCACTTTAG ATACTGATTT AAGTGATGCG TACTGGGAAA ATCTGCTGAC TGTGCGTAAC
GAAGTCAACA AGGTTATCGA GCAAGCGCGC CGCGATAAAC GTATTGGCGG CTCCTTGGAA
GCCGAAGTCA CGCTGTTTGC CGATGCTGCT TTAACTGAGC AGTTAACGCA CATTGGTGAT
GAGCTGCGTT TCGTCCTATT AACTTCAGAA GCCAAAGTAT TGCCATTGGC AGATGCGACA
AGCGATGCCG TTGAAACTGA ATTGGCTTCA TTGAAGTTAG TGGTAAATGC AACAACAGCA
GAGAAATGCG AACGTTGTTG GCACCACAGG GAAGAAGTGG GCAAGATTGA GGCTCATCCA
ACGCTGTGCC ATCGCTGCGT AACCAATATT GAAGGTGACG GCGAAGTTCG TCTGTTTGCG
TAA
|
|---|
| Protein sequence | MSDYKFTLNL PETEFPMRGN LANREPEMLE RWTKDGLYQQ IRDSRIGRTP FILHDGPPYA
NGSIHIGHSV NKILKDIIVK SKTMSGFDAP YVPGWDCHGL PIELKVEQKV GKPGQKISAA
EFREECRKYA AEQVDGQRAD FIRLGVLGDW QKPYLTMDFA TEANIVRSLS KVIENGHLHK
GVKPVHWCTD CGSALAEAEV EYEDKTSPAI DVAFTATDSK AVAAQFGVSD YSHPVAMVIW
TTTPWTLPAN RALSISPELD YSLVEFAKEG ATHAVILADV LVEACMTRYG AESHNVLGKV
KGAALELVRF KHPFLAFDVP AILGDHVTTD AGTGVVHTAP GHGQDDFVVG QKYGLEVANP
VGDNGVYKPD TEFFAGQHVF KANDNVVALL KEKGALLHHV AYRHSYPHCW RHKTPIIFRA
TPQWFISMDN QNLRKQALSE IEQTQWIPDW GQSRIEKMVE NRPDWCISRQ RTWGVPITLF
VHRETEELHP DSVSLMARVA NRIEQEGIQA WWDLDAAELL GEEAEQYRKV TDTLDVWYDS
GSTFASVVGA RPEFHGHGVD LYLEGSDQHR GWFMSSLMIS TAMTGKAPYK QVLTHGFTVD
GKGRKMSKSI GNVIAPQQVT NKLGADILRL WVAATDYSGE MTVSDEILNR SADAYRRIRN
TARFLLANLN GFDPAKDLVA VEDMVALDRW AVRRAAALQQ EIIEAYEQYN FHIVTQKLMQ
FCSVELGSFY LDIIKDRQYT AKQEGHARRS CQSALFHIAE AMVRWIAPIL SFTADEVWQL
LPGQRNAYVF TQEWYQDLQS ITLDTDLSDA YWENLLTVRN EVNKVIEQAR RDKRIGGSLE
AEVTLFADAA LTEQLTHIGD ELRFVLLTSE AKVLPLADAT SDAVETELAS LKLVVNATTA
EKCERCWHHR EEVGKIEAHP TLCHRCVTNI EGDGEVRLFA
|
|---|
| |