Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2928 |
Symbol | |
ID | 4253499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3496671 |
End bp | 3498161 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638119564 |
Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
Protein accession | YP_735056 |
Protein GI | 113971263 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0250419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACAA TGACTCATTA TGTGAATGGC GAGCACTCCG CCGCCAGTAC AAGAAGCCAA GAGATTTTCG AACCCGCTAC GGGAGAATGC CGAGGTCAGG TCTCCCTCGC GAGTCGCGAC GAAGTCTCCG CCGCCATTGC TATCGCCAAA TCGGCCTTCG ACACTTGGTC ACAGGTAACG CCCCTCAATC GTGCTCGTGT GTTATTTAAG TTTAAAGCGC TGGTCGAGCA ACATATGGAT GAGTTGGCGC GACTGATTAC CTTAGAGCAC GGCAAAGTGC TCGATGATGC GCGGGGAGAA CTCATCCGCG GCCTCGAAGT CGTCGAATTT GCCTGTGGTA TCCCACACTT GCTCAAAGGG GAGCATACGG AGCAGGTCGG CGGTGGCGTA GACGCTTGGT CAGTCAATCA AGCTTTAGGT GTTGTCGCAG GCATAGCGCC CTTTAACTTC CCCGTGATGG TTCCCATGTG GATGTTCCCA ATCGCGATTG CCTGCGGTAA CACCTTTATT ATGAAACCCT CGGAAAAAGA CCCAAGCGCG ATAATGCGTA TTGCGGAATT ACTCACCGAA GCTGGTCTCC CTGCGGGGGT ATTTAACGTG GTCAACGGTG ATAAAGAGGC CGTCGATACC CTGCTCAGCC ATGAAGATAT TCAAGCCGTC AGCTTTGTTG GCTCCACCCC GATAGCCGAA TACATTTACA GCACCGCATC TAAACACGGT AAACGGGTGC AAGCCTTAGG CGGCGCGAAA AACCATATGC TACTGATGCC GGATGCGGAT TTAGATCAAG CGGTGAGTGC CCTCATGGGC GCCGCCTATG GCAGCGCCGG CGAGCGTTGT ATGGCCATTT CGGTGGTATT GGCCGTAGGA GATGTGGGCG ACAAGCTGGT CGATAGATTA TTACCGCAAA TTCAACAGTT AAAAGTGGGC AATGGCCTCA CCCCAGAGAT GGAAATGGGA CCGTTGATCT CCCGCCAGCA CCTCGCCAAA GTCACGGAAT TTGTCGACGC TGGCGTCCAA GAAGGCGCGA CCTTAGTGGT AGATGGTCGT CAGTTAAGCG TGGCCGATCA TCAGCAGGGT TACTTCTTAG GGGCCTGTTT ATTCGATAAC GTCACCCCTG AGATGCGTAT TTACCGCGAA GAAATCTTCG GCCCAGTGCT GTCGATTGTG CGGGTTAAAG ACTATGCCAG CGCACTGGCG CTTATCAACC AACATGAATT TGGCAATGGC ACCGCCATCT TTACCCAAAG CGGTGAGGCT GCCAGACATT TTTGCCACCA TGTGCAGGTC GGTATGGTAG GGGTTAACGT GCCCATCCCA GTGCCTATGG CCTTCCACTC CTTCGGTGGC TGGAAACGTT CGCTCTTTGG TCCCCTGCAT ATGCATGGTC CTGATGGGGT ACGTTTTTAT ACCAAACGTA AAGCCATCAC GGCACGCTGG CCCGTAGGCA AACAGACTCA GGCCGAGTTT GTTATGCCCA CCATGAAATA A
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Protein sequence | MLTMTHYVNG EHSAASTRSQ EIFEPATGEC RGQVSLASRD EVSAAIAIAK SAFDTWSQVT PLNRARVLFK FKALVEQHMD ELARLITLEH GKVLDDARGE LIRGLEVVEF ACGIPHLLKG EHTEQVGGGV DAWSVNQALG VVAGIAPFNF PVMVPMWMFP IAIACGNTFI MKPSEKDPSA IMRIAELLTE AGLPAGVFNV VNGDKEAVDT LLSHEDIQAV SFVGSTPIAE YIYSTASKHG KRVQALGGAK NHMLLMPDAD LDQAVSALMG AAYGSAGERC MAISVVLAVG DVGDKLVDRL LPQIQQLKVG NGLTPEMEMG PLISRQHLAK VTEFVDAGVQ EGATLVVDGR QLSVADHQQG YFLGACLFDN VTPEMRIYRE EIFGPVLSIV RVKDYASALA LINQHEFGNG TAIFTQSGEA ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW PVGKQTQAEF VMPTMK
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