| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2912 |
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| Symbol | |
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| ID | 4253483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3477521 |
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| End bp | 3478798 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119548 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_735040 |
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| Protein GI | 113971247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.51273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.448199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA CCAATGATTC ATTGATGGCA CGTCGCCAAG CCGCAGTCGC AGGCGGTGTT
GGTCAAATTC ATCCTGTTTT TACTGCTCGC GCCGAAAACG CGACCGTGTG GGATGTTGAA
GGTCGAGAGT TTATCGATTT TGCGGGTGGT ATTGCTGTGC TCAACACTGG GCATTTACAT
CCTAAGGTGA AGGCGGCCGT TGCGGCGCAG CTTGAGGACT TTTCCCACAC CTGTTTTATG
GTGCTTGGCT ATGAAAGTTA TATTCAAGTC TGTGAAAAAC TGAATCAGTT AGTGCCGGGG
GATTTTGCCA AGAAGACGGC CTTATTCACC AGCGGCTCAG AAGCGGTTGA AAACGCAGTT
AAAGTGGCTC GTGCATACAC TAAGCGGGCG GGCGTGATTG CCTTTACCTC GGGTTACCAT
GGTCGCACTA TGGCGGCACT GGCGTTAACG GGAAAGGTCG CGCCTTACAG TAAAGGGATG
GGATTAATGT CGGCCAATGT GTTCCGCGCC GAGTTCCCCT GTGCGCTGCA CGGCGTGTCA
GATGATGATG CGATGGCCTC TATCGAACGT ATCTTTAAAA ATGATGCCGA GCCGAGCGAT
ATCGCGGCCA TCATCCTCGA GCCTGTGCAG GGTGAAGGTG GATTCTATGC CGCATCGCCA
GCCTTTATGC AGCGTTTACG CGCGCTTTGC GACCGTGAAG GTATTATGTT GATTGCCGAT
GAAGTGCAAA CGGGTGCGGG TCGTACCGGG ACCTTCTTCG CCATGGAGCA AATGGGTGTG
AGCGCCGATA TCACCACCTT TGCTAAATCC ATTGCCGGTG GTTTCCCTCT TTCTGGTATT
ACGGGTAAAG CTGAAGTCAT GGATGCCATC GGTCCCGGTG GCCTTGGTGG CACCTACGGC
GGTAATCCGC TGGCCTGTGC GGCGGCGCTC GCCGTACTTG AGGTGTTTGA AGAGGAAAAG
CTGCTTGAAC GTGCCAATGC AATTGGCGAG CGCATTAAGT CGGCGCTAAA TACTATGCAG
GTTGAACATC CTCAAATCGC CGATGTGCGT GGTCTAGGGG CGATGATCGC CATTGAGTTG
ATGGAGGATG GTAAACCCGC GCCTCAGTAC TGTGCCCAAA TCTTAGCCGA GGCCAGAAAC
CGAGGATTGA TCCTCCTCTC CTGCGGTACC TACGGAAACG TGCTGCGTAT TTTGGTGCCA
TTGACAGTGC CAGACGAGCA GCTCGGTGCG GGGCTGGGGA TTCTTAAAGC CTGCTTCGAT
GCCGTGTTAA AAGGTTAA
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| Protein sequence | MSTTNDSLMA RRQAAVAGGV GQIHPVFTAR AENATVWDVE GREFIDFAGG IAVLNTGHLH
PKVKAAVAAQ LEDFSHTCFM VLGYESYIQV CEKLNQLVPG DFAKKTALFT SGSEAVENAV
KVARAYTKRA GVIAFTSGYH GRTMAALALT GKVAPYSKGM GLMSANVFRA EFPCALHGVS
DDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD
EVQTGAGRTG TFFAMEQMGV SADITTFAKS IAGGFPLSGI TGKAEVMDAI GPGGLGGTYG
GNPLACAAAL AVLEVFEEEK LLERANAIGE RIKSALNTMQ VEHPQIADVR GLGAMIAIEL
MEDGKPAPQY CAQILAEARN RGLILLSCGT YGNVLRILVP LTVPDEQLGA GLGILKACFD
AVLKG
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