| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2910 |
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| Symbol | |
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| ID | 4253481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3474502 |
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| End bp | 3476052 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119546 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_735038 |
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| Protein GI | 113971245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.380758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.476442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTTG GTACCAATCA GGTAAGCAAG ACACATTCAT TTATGACTGT GTCACTTATC
GAATTATGGG AACGTTTTGG TTATTACGGC ATGCAGGCGC TGATCGTGTA CTTTATGGTG
CAGCGTCTTG GCTTTGATGA CTCCCGTGCA AACTTAGTTT GGAGTGCCTG TGCGGCGCTG
ATTTACGTGT CGCCAGCCAT TGGTGGTTGG GTTGGGGATA AAATTCTCGG CACCAAACGC
ACCATGCTGC TCGGTGCAGG CATTTTATCT GTCGGCTATG CCCTAATGAC AGTGCCAACT
GAAAACACTT GGTTTATGTT CTCCGCACTT GGGGTAATTG TGGTCGGTAA CGGCCTGTTT
AAGCCCAATG CCGGTAACTT AGTCCGTAAG ATTTACGAAG GCGACGATTC TAAAATCGAC
AGCGCCTTTA CCATCTATTA CATGGCGGTA AACGTAGGCT CGACCTTCTC TATGCTGCTA
ACGCCTTGGA TTAAGGACTA TGTAAATGCC CAATACGGTA ACGAGTTTGG CTGGCACGCA
GCCTTTGCCA TGTGTTGTGT GGGCTTAATC GTCGGCTTAG GTAACTATGC ACTGATGTAC
AAGAGCCTCG CCAACTATGG TTCAGAGCCA GATACTCGCC CAGTTAATAA GAAGAACTTG
GCGATCGTCT TGGTATTAGC GGCGCTTTCG GTTGTTGCTT CAGCCATTAT TCTTGAATAT
GAAGATGTTG CCCGTGTATT CGTATATGCG GCTGGTGTCG CGGTATTAGG GATTTTCTTC
CATTTAATTC GTACCAGTGA GCCAAGTGAG CGTGCAGGCC TTATCGCGGC GCTTATCCTC
ACAGTGCAGA CCGTCTTCTT CTTTATCTTC TATCAACAAA TGTCGACCTC ACTGGCCCTG
TTTGCGCTGC GTAACGTCGA TTGGGATTTC CAAGTCTTTG GTACCCATTT ATGGACTTGG
TCTCCTGCAC AGTTCCAAGC ACTGAATCCA ATCTGGATCA TGGTGTTAAG CCCAGTTTTG
GCCTGGAGTT ATTCTTGGGC GGGCCGCAAT AATAAGGACT TTTCGATTGC CGCTAAGTTC
GCCTTAGGTT TTGCGGTTGT CGCTATTGGC TTCTTTATCT ACGGTTTTGC AGGCCAATTT
GCCGTTGAGG GTAAAACCTC TTCTTGGGTG ATGATTTGGG GTTATGCCTC ATACTCTCTG
GGCGAACTGC TGGTGAGCGG TCTTGGTTTA GCCATGATCG CCCGCTACGT GCCTGCACGC
ATGGGCGGCT TTATGATGGG CGCGTATTTC GTGGCATCGG GGATTTCCCA GTACTTAGGC
GGCGTTGTAG CCAACTTTGC TAGCGTGCCA CAGGACTTAG TCGATCCGCT GCAAACTCTG
CCCGTTTATA CCAATTTATT CAATAAATTA GGTATTGCGG CCGTGGTCTG TACTTTTATC
GCCTTAGCCG TATTGCCGCT GATGCGCCGT TTAACAGAAA GCCATCATGC CCATAACAGT
ATTGAAGATA ATGCTTCGGC CTCACTGCGT GATGTGAAAG CCGAGCAATA A
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| Protein sequence | MTLGTNQVSK THSFMTVSLI ELWERFGYYG MQALIVYFMV QRLGFDDSRA NLVWSACAAL
IYVSPAIGGW VGDKILGTKR TMLLGAGILS VGYALMTVPT ENTWFMFSAL GVIVVGNGLF
KPNAGNLVRK IYEGDDSKID SAFTIYYMAV NVGSTFSMLL TPWIKDYVNA QYGNEFGWHA
AFAMCCVGLI VGLGNYALMY KSLANYGSEP DTRPVNKKNL AIVLVLAALS VVASAIILEY
EDVARVFVYA AGVAVLGIFF HLIRTSEPSE RAGLIAALIL TVQTVFFFIF YQQMSTSLAL
FALRNVDWDF QVFGTHLWTW SPAQFQALNP IWIMVLSPVL AWSYSWAGRN NKDFSIAAKF
ALGFAVVAIG FFIYGFAGQF AVEGKTSSWV MIWGYASYSL GELLVSGLGL AMIARYVPAR
MGGFMMGAYF VASGISQYLG GVVANFASVP QDLVDPLQTL PVYTNLFNKL GIAAVVCTFI
ALAVLPLMRR LTESHHAHNS IEDNASASLR DVKAEQ
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