| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2906 |
|---|
| Symbol | |
|---|
| ID | 4253477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3467143 |
|---|
| End bp | 3467586 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638119541 |
|---|
| Product | GatB/Yqey domain-containing protein |
|---|
| Protein accession | YP_735034 |
|---|
| Protein GI | 113971241 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1610] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000160635 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0394682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTAA TTGATCAGCT AAAAGACCAT ATGAAACAGG CCATGATCGC CAAAGAGAAG
GCGAGATTGG GCACTATTCG TATGGCACTT GCAGCCATTA AACAGATTGA AGTGGATACC
CGCGAAACTC TGAATGATGA GCAGGTTATA GCTGTCTTAA CCAAAATGGT GAAACAACGT
CGCGATTCGA TTGCTCAATA TGAAGCAGCG GGTCGTAACG AGTTGGCCGC AGCAGAAGCA
GAAGAGATTC AAGTCATTGA AACTTTCCTG CCAACTCCCC TCTCTGAGGC GGAAATTGCC
GCGTTCATCG ATGCCGCTAT TGCTGAAATA GGCGCATCCT CCATGGCGGA TATGGGCAAA
GTAATGGGAG CATTAAAACC TAAAGTTCAA GGACGTGCAG ACATGGGCGC TATCGGCGCT
ATGATCCGTG CAAAATTGCA ATAA
|
|---|
| Protein sequence | MSLIDQLKDH MKQAMIAKEK ARLGTIRMAL AAIKQIEVDT RETLNDEQVI AVLTKMVKQR
RDSIAQYEAA GRNELAAAEA EEIQVIETFL PTPLSEAEIA AFIDAAIAEI GASSMADMGK
VMGALKPKVQ GRADMGAIGA MIRAKLQ
|
|---|
| |