Gene Shewmr4_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2888 
Symbol 
ID4253459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3448450 
End bp3448905 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content47% 
IMG OID638119523 
Producthypothetical protein 
Protein accessionYP_735016 
Protein GI113971223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.58238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000034338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCTGA GCGAGCAAGA ATCCTCTTTG GCAACTCAGG CTACGCCGTC CTTGGCGAAA 
GCCCGTTTAC CTAAACGCTT AATTGCCTTG CTGCTACTCT ATGTTGCGGC ATCGGTTAGC
GGCTTAATTG CCAAACAAGG GGTGCTTTTC TGCCTGTTAA CCCTATTGAT GGTGCTTGGG
ATTATCGGTC GCCAAAAGGC TGGACTGATT ATGTTAAGGG GTTACACCTT AGTGCAATTG
GCGCTAGTCA GCATGTTGCC TGTGATCCTT TATGATCCCG ACAACCTAGT GGCCGGGCCA
ACCACAGTGC ATCTTGGCGA GTGGCAAGAA AAGCTGCCCG ATTACGTGAT TTTTATCGTG
TTGATTGTCT TATCTTTATT GCAGGTGTGG GTGGCATTCG ATAAGAAAGT GAAGGCTTGG
TTTAAACCTA AGCTTAATCT GAATATTATG AATTAA
 
Protein sequence
MSLSEQESSL ATQATPSLAK ARLPKRLIAL LLLYVAASVS GLIAKQGVLF CLLTLLMVLG 
IIGRQKAGLI MLRGYTLVQL ALVSMLPVIL YDPDNLVAGP TTVHLGEWQE KLPDYVIFIV
LIVLSLLQVW VAFDKKVKAW FKPKLNLNIM N