| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2881 |
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| Symbol | |
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| ID | 4253452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3435566 |
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| End bp | 3436966 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119516 |
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| Product | peptidase M23B |
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| Protein accession | YP_735009 |
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| Protein GI | 113971216 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000532238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000791404 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAAAGG TTATAACGTT ATTTAAATTG CTGCCTAAAA AGCATCAAAT TCTCCTCAGC
ATTCTTTCTG TTATCACTAC GATAACCCTG CTCTTTCCCT CTGAAGAAGC GCAAGCTTCA
AGACAAACTC AAGGTGTCGC AGACCAAGCT CAAGTCAATA CCCGTTACGA TGTTCCCTTA
GCCTTTCGCT CACCAGAGCG TCCAGAAGGT GTTGAGGGCC AATCGCAAGA TGCATCCACC
AACGCCACGC CGTTATCTTC GGCCGACGCC TTAGCCGCTG GCAATGTGTC AGCCAGTGAA
ACCTTAGAGA GCGCCCACCA TAGGGACGTA GAACATTTTA ATGTGAAAAA TGGCGATACC
TTAGCCGCAG TATTTGAGCG CGCGGGACTC ACCAGCAAAG ATGTGTATGA AATTACCCAG
TTGCCACTCG CCAAACAGAA TCTGTTAAAA ATCATCCCAG GCGAAGAAAT CGTGATTTCA
AAGAATGCTA AGGGCGATTT AACCGAAGTC CGCTACCGTG TCGATGCGGT ATCGACTTTA
GTGATCACTA AGGATCAGGA TAAGTATTCC GAGAAAATCT CCGAAAAGGA CATTGAAATA
CGCACCCAAT TCACCAGTGC GAAAATCAAG AGTAACTTCT GGAATGCCGC CGTCGATGCG
GGTTTAAACG CAAACCAAAT TATGCAGCTC TCGACCGTGT TTGGCTGGGA TATCGACTTT
GCCTTGGATT TACGCGAAGG CGATAGCTTC GCCATTATCT ATGAGCAGGA ATATGCCGAA
GGTGAGTTTT TACGTAACGG CAATATCCTC GCCGCCGAGT TTATCAACCA AGATGAACGT
TACACCGCGA TTCGTTATAC CGACGGCAAC TATTACTCCG AAAACGGCAC CAGCATGCGT
AAGGCCTTCC TGCGCTCACC GGTCGACTTT AAATACGTCA GCTCCAACTT CAACCCGAAA
CGTCTACACC CTGTGACGGG GCAAGTTAAG GCTCACCGCG GCGTTGACTA TGTTGCCGCC
ATTGGCACCC CCATTAAGTC GGCGGGTAAT GGCCGAGTTA TCGAATCCGG CTACAATCAA
TTTAACGGTA ACTATGTGTT CATTAAGCAC AACGATACCT ACACGACTAA GTATTTGCAT
TTGACCAAAC GCAACGTCAG TAAAGGGGCC AGCGTTAAGC AGGGGCAAAT TATCGGCACC
TTAGGTAAAA CAGGACGCGT CACCGGCGCT CACCTACACT ATGAATTTAT CGTTAATGGC
GTGCACCGTA ACCCAAGAAC GGTTGATTTA CCTAAGGCCG AATCGATTGC CCGTAAAGAA
AAGCCACAAT TCGATGCGCT CAGCAAACAG TTGATGGCCA GCATTTCACA GAACAAGCAA
ACCCAATTGG CGATGCAATA A
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| Protein sequence | MGKVITLFKL LPKKHQILLS ILSVITTITL LFPSEEAQAS RQTQGVADQA QVNTRYDVPL
AFRSPERPEG VEGQSQDAST NATPLSSADA LAAGNVSASE TLESAHHRDV EHFNVKNGDT
LAAVFERAGL TSKDVYEITQ LPLAKQNLLK IIPGEEIVIS KNAKGDLTEV RYRVDAVSTL
VITKDQDKYS EKISEKDIEI RTQFTSAKIK SNFWNAAVDA GLNANQIMQL STVFGWDIDF
ALDLREGDSF AIIYEQEYAE GEFLRNGNIL AAEFINQDER YTAIRYTDGN YYSENGTSMR
KAFLRSPVDF KYVSSNFNPK RLHPVTGQVK AHRGVDYVAA IGTPIKSAGN GRVIESGYNQ
FNGNYVFIKH NDTYTTKYLH LTKRNVSKGA SVKQGQIIGT LGKTGRVTGA HLHYEFIVNG
VHRNPRTVDL PKAESIARKE KPQFDALSKQ LMASISQNKQ TQLAMQ
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