| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2868 |
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| Symbol | |
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| ID | 4253439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3420948 |
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| End bp | 3421859 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119503 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734996 |
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| Protein GI | 113971203 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000208433 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.445531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TACCTAGCCT CAAGAATTTA TTCTATTTGG TGAATCTTCA CCAAGAACAG
AATTTTAACC GCGCCGCTAA GGTGTGCTTT GTTAGCCAAT CAACGCTGTC GAGTGGGATC
CAGAATCTTG AAGAACAGCT TGGTCATCAA TTGATTGAAC GTGATCATAA ATCCTTTATG
TTCACCGCAA TTGGTGAAGA AGTCGTGCAA CGCTCCCGTA AAATCCTCAC GGATGTGGAT
GATTTAGTCG AACTGGTTAA AAACCAGGGC GAACCAATGA CGGGGGATAT TCGCTTAGGC
TGTATTCCAA CGATTGCGCC ATTTTTATTA AGCCGCGTGG TTAAGCAATG TCAGCAAGCT
TATCCGGCGA TGAGTTTATT GCTCAAAGAG GACACGACGG AGCGTTTGCT CGATGCCTTA
GGTAAGGGGG AGTTGGATTT ACTGATCCTT GCCTTGCCCG TGGATACCAG TGGTTATCAC
AGCATGAAAG TGGGGATAGA TCCCTTTAAG ATGGTGATCC ATAAAGACTT GGCAGGCGGC
ATTCATCAGC CTATCGATTA CCAAACATTG CCCGATGAGA GTATCTTCCT GCTGCAGAGT
GAACACTGCA TTACGGGGCA TGCGATTACC GCTTGTCAGT TAGGTGACAG TGCGAAGGTG
AATCCCTTTG CGGCGACCAG TCTGCATACC CTAGTGCAAA TGGTGAATAG CAAACTGGGC
ACGACTTTCT TACCGCAAAT GGCGATCGAT GCTGGTATTT TAAACGATAC CGATCTGGTG
GTGATGACTC CGCCCGGTGA AGCGCCTTAC CGCGATATCG GTTTAGTCTG GCGACAAACA
ACCAGCCGAA TTTTGACCTT CCGTACCTTA GGTTTGCTTA TCCAAAAGCT GTTAACCAAA
GACATGGAAT AA
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| Protein sequence | MKNLPSLKNL FYLVNLHQEQ NFNRAAKVCF VSQSTLSSGI QNLEEQLGHQ LIERDHKSFM
FTAIGEEVVQ RSRKILTDVD DLVELVKNQG EPMTGDIRLG CIPTIAPFLL SRVVKQCQQA
YPAMSLLLKE DTTERLLDAL GKGELDLLIL ALPVDTSGYH SMKVGIDPFK MVIHKDLAGG
IHQPIDYQTL PDESIFLLQS EHCITGHAIT ACQLGDSAKV NPFAATSLHT LVQMVNSKLG
TTFLPQMAID AGILNDTDLV VMTPPGEAPY RDIGLVWRQT TSRILTFRTL GLLIQKLLTK
DME
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