Gene Shewmr4_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2841 
Symbol 
ID4253412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3395693 
End bp3396964 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content47% 
IMG OID638119476 
Producthypothetical protein 
Protein accessionYP_734969 
Protein GI113971176 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.063755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCTA TATCGACAAG CGCACTCCTC ATTTTCTTAC TAGTGCTTAT TCTTTGTTCT 
GCCTACTTTT CAGGTTCTGA AACCGCCATG ATGACCCTTA ACCGCTATCG GTTAAGACAT
CTCGCCTCAA ACGGCCATAA AGGTGCCATT CGTGCCCTCA AGTTGCTCGA ACGTCCAGAC
CGCTTAATTG GCTTAATTCT GATTGGCAAT AACCTGGTTA ATATTCTTGC CTCGGCCATT
GCCACCATTG TTGGTATGCG CCTTTGGGGC GATTTAGGCG TCGCGATAGC CACAGGTGTG
CTGACCTTGG TCGTATTGGT CTTTGCCGAA GTCACACCCA AAACCATCGC CGCCTTGAAC
CCTGAGCGAA TTGCCTTCCC ATCGAGTATT TTACTCATTG GTTTATCAAC AATTTTTGCC
TATGTCGTTA CCAGCGTTAA CTGGATAACC ACAGGTATGC TGCGTCTCTT TGGCATCAAA
ACCATCAGCA GCAGTGATGC ACTCAGCCAA GAAGAATTAA GGACGGTAGT CCATGAGGCT
GGCGCCTTGA TCCCCCAACG CCACCAAGAG ATGTTGTTAT CAATCTTGGA TTTAGAGAAG
GTCACCGTAG AGGACATCAT GGTGCCGCGC TCGGATATTT ACGCCATTAA CGTCAACGAT
GATTTTAAGT ATATCAACCG TCAAGTGATC CAAAGTCCAC ATACTCGTGT ACTGGTTTAC
CGCGATACCA TTGACGATGC CGTCGGCTTT ATTCATCTGC GTGACGCGCT GCGCCTGCAA
TCGAAAGAGC AGTTCAGTAA GTCCTCATTG CTACGTGCTG TCAAAGAACT CTACTTTATT
CCCGAAGGTA CACCGCTCAA TGTGCAATTA GCCAACTTTC AGCACAATAA AGAACGTATC
GGCCTAGTAG TCGATGAATA CGGTGATATC CAAGGATTAG TGACACTCGA AGATATTCTC
GAAGAAATTG TCGGTGACTT CACCACCTCT ATGCTGGCCA CACCGAGTGA AGACATTACC
GCCCAGCAGG ATGGAAGCTA CTTAGTCGAT GCCAGTATCA CTATCCGTGA TTTGAATAAA
GAAATGAAAT GGGACTTCCC AACCGATGGC CCCAAAACCC TCAATGGCCT GATCTTAGAG
TATTTAGAGG ATATCCCCGC AGAAAACACT AGCCTTCGCC TAGCCGGTTA TCCATTAGAA
GTCATTGAAG TCGCAGACAA TATGGTCAAA ACCGTACGTA TCATTCCACA GCATTATCAG
TCTCCACGCT AA
 
Protein sequence
MDAISTSALL IFLLVLILCS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD 
RLIGLILIGN NLVNILASAI ATIVGMRLWG DLGVAIATGV LTLVVLVFAE VTPKTIAALN
PERIAFPSSI LLIGLSTIFA YVVTSVNWIT TGMLRLFGIK TISSSDALSQ EELRTVVHEA
GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDIYAINVND DFKYINRQVI QSPHTRVLVY
RDTIDDAVGF IHLRDALRLQ SKEQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQHNKERI
GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MLATPSEDIT AQQDGSYLVD ASITIRDLNK
EMKWDFPTDG PKTLNGLILE YLEDIPAENT SLRLAGYPLE VIEVADNMVK TVRIIPQHYQ
SPR