Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2839 |
Symbol | |
ID | 4253410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3393141 |
End bp | 3394514 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119474 |
Product | signal recognition particle protein |
Protein accession | YP_734967 |
Protein GI | 113971174 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000124707 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGA ATCTAACCGA CAGACTGTCA CGCACGCTGA AAAATATCAG TGGCCGTGGT CGCTTAACCG AAGAAAACGT TAAGGAAACC CTGCGCGAAG TGCGTATGGC GCTGCTGGAG GCCGATGTTG CCCTGCCTGT GGTGCGTGAA TTCGTTAACA ATGTAAAAGA ACGTGCCGTT GGTCAGGAAG TGGCGAAGAG CTTAAGTCCT GGTCAAGCCT TTATTAAGAT TGTTCAAAGT GAACTTGAAA AATCCATGGG CGAGGCAAAC CAAGCTCTGG ATTTAGCCAC TCAGCCGCCA GCCGTGGTGA TGATGGCGGG TCTTCAAGGT GCGGGTAAAA CGACCAGCGT TGCCAAACTG GGTAAGCTGC TGCGTACGCG CCATAAAAAA TCGGTATTAG TTGTCAGTGC TGACGTTTAT CGTCCTGCGG CGATTAAACA GCTTGAAACT TTAGCGACCG AAGTCGATGT GGAGTTCTTC CCATCGGATG TGAGCCAAAA GCCAATCGAT ATCGCCAAGG CGGCCATTGC CCACGCCAAA CTCAAATTTA TCGATGTGGT GATCCTCGAT ACCGCGGGTC GTCTGCACGT CGATGAAGCC ATGATGGATG AGATCAAGGC GCTGCACGCG GCGGTTAAGC CGATTGAGAC ACTGTTCGTA GTCGATGCCA TGACAGGTCA AGACGCGGCA AACACGGCCA AAGCCTTTAA CGAAGCGCTG CCGCTCACCG GTGTTATTTT AACTAAGGTC GACGGTGATG CGCGCGGTGG TGCGGCATTA TCGATTCGCC ACATTACAGG CAAGCCGATT AAATTCCTCG GTGTCGGCGA GAAGACCGAT GCCCTAGAGC CTTTCCATCC AGACCGTATC GCCTCACGTA TTCTCGGCAT GGGCGACGTA TTATCGCTTA TCGAAGAAGT TGAGCGCGGT GTCGATAAAG ATAAGGCGAT GAAGCTGGCT TCCAAAGTGA AGCAGGGCGG CAGTTTTGAT CTTGAAGATT TCCGCGAGCA GCTACAGCAG ATGAAAAACA TGGGCGGCAT GATGAGCATG ATTGAAAAGC TGCCCGGTGT GGGTCAGTTG CCACCGGATG CCTTAGCGCA AATCCAAGAC GGTAAAATGA CCCGTCAAAT GGAAGCCATC ATTAACTCAA TGACGGCGAA AGAGCGTAAA AACCCCGATT TAATCAAGGG CTCACGTAAG CGTCGTATCG CTGCGGGTTC TGGTACGCAA ATTCAAGACG TGAACCGTTT ATTGAAACAG TTTACCCAAA TGCAAAAGAT GATGAAAAAG ATGTCTGCCA AGGGCGGCAT CCAGAAGATG ATGCGCGGAA TGCGTGGCAT GATGCCTGGC GGGATGAAAT TTCCTGGCCG TTAA
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Protein sequence | MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV GQEVAKSLSP GQAFIKIVQS ELEKSMGEAN QALDLATQPP AVVMMAGLQG AGKTTSVAKL GKLLRTRHKK SVLVVSADVY RPAAIKQLET LATEVDVEFF PSDVSQKPID IAKAAIAHAK LKFIDVVILD TAGRLHVDEA MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFNEAL PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV LSLIEEVERG VDKDKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMSM IEKLPGVGQL PPDALAQIQD GKMTRQMEAI INSMTAKERK NPDLIKGSRK RRIAAGSGTQ IQDVNRLLKQ FTQMQKMMKK MSAKGGIQKM MRGMRGMMPG GMKFPGR
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