| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2838 |
|---|
| Symbol | rpsP |
|---|
| ID | 4253409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3392674 |
|---|
| End bp | 3392922 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638119473 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_734966 |
|---|
| Protein GI | 113971173 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000137634 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACCA TTCGTTTAGC TCGTGGTGGC GCTAAAAAGC GTCCATTTTA CAACATCGTT
GTTGCTGACA GCCGTAACGC TCGTGACGGT CGTTTCATTG AGCGTGTTGG TTTCTTCAAC
CCATTGGCTC GTGGCCAAGA AGAAACTTTA CGTTTAGACC TAGCTCGCGT TGAGCACTGG
GTTTCTAACG GCGCTGCGAC AACTGATCGC GTAGCAAAAT TGATCAAAGA CGCTAAAGCT
GCTGCTTAA
|
|---|
| Protein sequence | MVTIRLARGG AKKRPFYNIV VADSRNARDG RFIERVGFFN PLARGQEETL RLDLARVEHW
VSNGAATTDR VAKLIKDAKA AA
|
|---|
| |