Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2809 |
Symbol | |
ID | 4253380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3363156 |
End bp | 3364457 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119444 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_734937 |
Protein GI | 113971144 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTGCCCC GAGATTTTAC GCGCTATCTC AGATTGCGGT TATCAAAAAA TGACACCTAT TCAGCAGCAA GCGATCCCCG CCATCCGCCG CGGGCAAGAT GTGCTCGCCA GCGCGCAAAC GGGCACTGGT AAAACGGCGG CATTCGCATT ACCTATACTG CAAAAGATGG CAGAAAATCC CAGCGAGACC TTAAAATCGA ACGCGCGGGT ATTAATCTTA ACGCCGACTC GCGAGCTCGC AGCTCAAGTT GCCGACAACG TTGAAGCCTA CAGCAAGTAT TTAAATTTCA GCGTGTTAAC CATTTACGGC GGTGTAAAGG TTGAGACTCA GGCGCAAAAA CTTAAACGCG GTGCCGATAT TATTGTCGCG ACGCCAGGGC GTTTGCTCGA GCACCTTACC GCCTGTAATT TAAGTCTCTC TAGCATCGAC TTTTTAGTGC TCGATGAAGC CGACCGTATG TTAGACATGG GCTTTAATGC GGATATTCAA AAAATCCTCC AAGCGGTGAA TAAGAAGCGT CAAAACCTAT TGTTCTCGGC CACCTTCTCC AGCGCGGTGA AAAAACTGGC CAACGAGATG ATGGTCAAGC CTCAAGTCAT CAGCGCCGAT AAGCAAAACA CCACCGCAGA TACCGTGAGC CAAGTGGTGT ATCCGGTTGA GCAGCGCCGT AAGCGCGAAC TCTTATCCGA ACTGATTGGT AAGAAGAACT GGCAACAAGT GTTGGTCTTT ACCGCGACGC GTGATGCGGC CGACACCTTA GTGAAAGAAT TGAATTTAGA CGGCATTCCG TCTGAAGTGG TGCACGGAGA GAAGGCGCAA GGTAGCCGTC GCCGCGCACT GCGTGAGTTT ATGTCGGGTA AGGTACGCGT CTTAGTCGCG ACCGAAGTCG CCGCCCGCGG CTTAGATATT CCCAGCCTTG AGTATGTGGT CAACTTCGAC TTACCCTTCC TCGCCGAAGA CTATGTACAC CGTATTGGCC GTACCGGTCG CGCGGGTAAA TCTGGGGTCG CGATTTCATT TGTGAGCCGT GAAGAAGAGC GCACCTTAGC GGATATTGAA AAGCTTATCG GCCAAAAAAT TCGTCGTATT ACCGTTCCCG GATACGAAGT TGGTAGCCGC GACTTGCTGT TAAAGCAGCT ACAAACCCGT CGCAGTTTTG CCAAGAAACA ACAGCGACTC GACAACGTCA GCGAGCAGAT TGTCGCCGAG AAAAGCATGC AGGGCCGCCG CGTGAAAATG AAAGTTGGCC AAGCCCCAAG CAAGGCGAAA AAGCTGAAAT AA
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Protein sequence | MRFESFSFCP EILRAISDCG YQKMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL QKMAENPSET LKSNARVLIL TPTRELAAQV ADNVEAYSKY LNFSVLTIYG GVKVETQAQK LKRGADIIVA TPGRLLEHLT ACNLSLSSID FLVLDEADRM LDMGFNADIQ KILQAVNKKR QNLLFSATFS SAVKKLANEM MVKPQVISAD KQNTTADTVS QVVYPVEQRR KRELLSELIG KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGEKAQ GSRRRALREF MSGKVRVLVA TEVAARGLDI PSLEYVVNFD LPFLAEDYVH RIGRTGRAGK SGVAISFVSR EEERTLADIE KLIGQKIRRI TVPGYEVGSR DLLLKQLQTR RSFAKKQQRL DNVSEQIVAE KSMQGRRVKM KVGQAPSKAK KLK
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