Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2752 |
Symbol | |
ID | 4253323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3286620 |
End bp | 3288005 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119387 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_734880 |
Protein GI | 113971087 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG ACACACTCGG CTTATCTTCC CCCATTTTGA ATGCGATAGC TGAGTGTGGC TATCAGCAAC TCACGCAAGT GCAGCAGCAA GTGATCCCCT TAGCTCTCGA GGGGAAAGAC ATTATGGCCT GTGCCCAAAC GGGAACGGGT AAAACCGCTT CTTTTGCATT ACCCGTACTC GAGCAACTGT CAAAGCAGCC TAGCGATAAA CCCTTGTTGC GTGCTTTAGT GATGACGCCT ACTCGTGAAC TGGCGATTCA AGTGTGCGCT AATATTCAAA AATATAGTCA GTTCCTCCCC CTGAAAACCT TAGCGGTTTA TGGCGGCGCG AACATGAATC CCCAGCGTAA AGGGGTGGAG CAGGGCGTTG ATATCCTCGT CGCGACACCG GGACGACTCT TCGACATTAT TGGTCAGTTC AATTTAGATC TGTCCACAGT GACCACCTTA GTGATCGACG AAGCGGATCG TATGCTCGAT TTAGGCTTTG TGCGCGACAT TGAAAAGGTG AAGCGTCTTA TTGCGACGGA ACATCAAACC ATGTTGTTTT CAGCCACCTA CAGCGATGCG GTCAAGCAAC TTTCCCATAA GATGCTCAAT CAACCCGAGT GGGTTAACGT GGCCGAAAAT GCCACTGCAT CCACCGTTGA GCAGTTGGTC TATCGAGTCG ATAAACGCCG CAAGGCCGAA TTATTGTCAG AGCTTGTCGG GCGCAACAAT TGGCGTCAGG TGCTGGTGTT TGCCAGCACT AAGGAATGCG CCGAGCATCT ATTGCAGGAA CTCACTCTCG ATGGGATCAG TGCGGGCGTG TTCCACGGGG ATAAAACCCA AGGCGCGCGT AATCGCGTGC TCGATGATTT TAAAGCGGGC AAATTGCGAG TGCTGGTGGC GACCGATGTG GCGGCGCGCG GCTTAGATAT TCAGGCGCTG CCCTTAGTGA TTAACCTCGA ATTGCCATTC CTTGCGGAAG ACTATGTTCA CCGTATTGGC CGTACTGGCC GCGCGGGACT CTCGGGCCGC GCGATATCAT TTGTGTCCCC CGCCGATGAT GAGATGCTAG CCGAGATTGA AGCCTTAATC GGCCAAACTT TGCCGGTCAC AGTGCAGCCT GGTTATGAAG AAGGCACGCC GCTGCCTGCG CGTTACCGTG AGGCGCCGAC GGCAACCACT AAGACCGCTA AGTGGAATTA CAAGAGCAGT CGCAATACGG GGGCTAAAGG CGCGGGCGGC AATGGCACTA AAGCTAATGG CGCGCGGGGC AAGAGCGGCT TTGGCGGCAA CGCCGGATTT GGTCAATCGA GCGAAAGCCA AGCGCGGGCG CGTAAATCGC CAGCCCGTGA AGGTAAATAC GCTAAAAATA AGCCGAATAC TCAAAAGGGT AAATAA
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Protein sequence | MKFDTLGLSS PILNAIAECG YQQLTQVQQQ VIPLALEGKD IMACAQTGTG KTASFALPVL EQLSKQPSDK PLLRALVMTP TRELAIQVCA NIQKYSQFLP LKTLAVYGGA NMNPQRKGVE QGVDILVATP GRLFDIIGQF NLDLSTVTTL VIDEADRMLD LGFVRDIEKV KRLIATEHQT MLFSATYSDA VKQLSHKMLN QPEWVNVAEN ATASTVEQLV YRVDKRRKAE LLSELVGRNN WRQVLVFAST KECAEHLLQE LTLDGISAGV FHGDKTQGAR NRVLDDFKAG KLRVLVATDV AARGLDIQAL PLVINLELPF LAEDYVHRIG RTGRAGLSGR AISFVSPADD EMLAEIEALI GQTLPVTVQP GYEEGTPLPA RYREAPTATT KTAKWNYKSS RNTGAKGAGG NGTKANGARG KSGFGGNAGF GQSSESQARA RKSPAREGKY AKNKPNTQKG K
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