Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2735 |
Symbol | |
ID | 4253306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3265098 |
End bp | 3267902 |
Gene Length | 2805 bp |
Protein Length | 934 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119370 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_734863 |
Protein GI | 113971070 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATTA ATTATGACGC TGTTTATAAA GAGCTTATTC AACAACTCGG CGAATCTGCC GTCTCAAATG ACCCTGTGCG CCGCTTTGCC TGGTCAACGG ATGCCAGTTA TTTCCGTATC GTACCTGAAA TCGTGGTCCA CGCAGATAGC CTCGAACAAG CGAAACAGAC CTTAGCCATC GCCCGTGCCC ATAAAGTGCC AGTGACATTC CGTGCGGCGG GGACCAGTTT ATCTGGCCAA GCCATTGGCG AAGGGATTTT ATTGATCTTG GGCCACGACG GTTTTAGAAC CATAGAAATC AGTTCCGACA GCAATAAGAT CACCTTAGGC GCGGCGGTGA TTGGTGCCGA TGCCAACGCG GCGCTCAAGC CTCTCAATAA GAAAATCGGT CCCGATCCGG CGACCCTTGC CTCAGCCATG GTCGGCGGTA TTGTGTCTAA CAACGCCTCG GGCATGTGCT GTGGTACGGC GCAAAACAGT TACCAGACCA TCGCCTCGGC TAAGCTGCTA TTTGCCGATG GTACCGAGCT CAACACAGGT TGCGATAAGT CTAAGGCCGC CTTTACCCAA AGCCACGGCG AGTTACTCGA CTCACTGGCC TCACTGGCTA AATTAACCCG CAGCAATGAG GTGCTCGCGC AGCGTATTCG CAAAAAATAC TCCATCAAAA ACACCACGGG CTATAGCATT AATGCCCTAG TGGATTTTGA AGATCCGTTC GATCTGATTA ACCATCTCAT CGTCGGCGCC GAAGGTACCT TAGCCTTCGT CGAAGAAGTC ACTTACCACA CGGTCGATGA AGCCAAATTT AAAGCCTCGG CGATGGCGGT ATTTTTCAAC ATGGTGGATG CGGCGAGTGC CATTCCACCG ATTATTGGCG ATAGCGTTGC CGCCGCCGAA TTACTCGACT GGGCATCCAT CAAGGCCGTC ACCGGTAAAA AAGGCATGCC AGACTGGCTC AATGAGCTGC CAGAAGGCGC GGCCATCCTG TTGATTGAGT CCCGCGCTAA CGATGCCCAA ACCTTAGAAA GCTATACCCA AGATGTGATT GCCAAACTCG CGCACATCAA AACAGAGCGT CCGATTAGCT TCAGTAGCGA TGCCAACGTG TACAGCAAAT ACTGGGCAAT GCGCTCTGGC CTGTTCCCCA TTATCGGTGG CGAGCGACCA AAGGGCAGCT CAGTCATCAT CGAAGACGTG GCCTTTAACG TCGAACATTT AGCCGCGGCC GCCGCCGATT TAACCGAGCT ATTCCATAAG CACGGCTATC CCGAAGGTGT AATATACGGC CATGCGCTGG CGGGTAACTT CCACTTTATT ATCACCCCGA CCTTCGCCTC CCAAGCCGAC ATCGAGCGCT TCCAAGGCTT TATGCAGGAT GTGGCCGAGA TGGTGATCCA TAAATACGAT GGTTCGATGA AGGCCGAGCA TGGTACTGGC CGCGCCGTTG CGCCTTTCGT TGAAATGGAA TGGGGCGCCG ATGCTTACAC CCTCATGAAA CGCATCAAGC ATATCTTCGA CCCAGAAGGC CTGCTCAACC CCGGCGTTAT CTTAAACGAC GACAGCACAG TGCACGTGAA AAACATCAAG CCTTGCCCTG TGGTCGATGA TTTTGTCGAT AAGTGTATCG AGTGTGGTTT CTGCGAAAAG ACCTGCCCGA CTTCGGCGCT GAACTTCTCG CCACGTCAGC GGATCGCCAC CCTGCGTGAA ATCGAGCGCT TAGAGCAATC TGGCGATAAA GCCGCCGCCG ATAAAATGCG TGCCGATGCC AAGTATGATG TGATTGATAC CTGCGCGGCT TGCCAGCTCT GTACTATCGC CTGCCCAGTC GATAACAGCA TGGGTCAGTT AGTTCGTAAA CTACGCACGC CCTATATCAG CACCACTGAG CAAAAAGTGT TGGATTTCCA AGCCAAACAC TTTGGCGCCG TCAACCAAGT GATCAGCACA GGCTTTGACG TGTTGGGAGT CATCCATAAG ATCACCGGCG ATGGTATCAC CAACGCGCTG ATGAAAACTG GCCGTTTACT CTCCAAAGAA GTGCCCTATT GGAATCCAGA CTTTCCTAAA GGTGGCAAAC TGCCTAAACC GTCCCCCGCA AAAGCGGGCC AAGAAACCGT GGTTTACTTC CCTGCCTGCG GTGGTCGCAC CTTTGGGCCA ACGCCAAAGG ATCCCGATAA TCGCACTTTG CCAGAGGTGG TTGTCACCCT GCTCGAGCGC GCGGGCTATA ACGTTATTAC CCCAGAGAAG ACCCGCGATT TATGCTGCGG CCAGATGTGG GAATCTAAGG GCGACTTTAA AAACGCCGAC GCCAAACGCC AAGAGCTTAT CGATGTGGTC AGCAAGATGA GTCATGGCGG CAAAATCCCA GTATTAGTCG ATGCTCTGTC TTGTACCTAT CGTACCCTCA CGGGTAACCC TCAGGTGCAA ATCACTGACT TGGTTGAGTT TATGCACGAC AAGCTGCTGG ATAAGCTGAG CATCAACAAA AAGGTCAATG TAGCTCTGCA CTTAGGTTGT AGCGCTCGTA AGATGAAGTT AGAGCCTAAG ATGCAAGCCA TTGCCGATGC TTGTTCGAGC CAAGTGCTCA AACCTGCGGG CATTGACTGC TGCGGTTACG CCGGTGAAAA AGGCCTGTAT AAGCCAGAAA TCAACGCCAG CGCCCTGCGT AATATCAAAA AGCTCATTCC AGTCGAGATT AAGGAAGGCT ATTACGCCAA CCGTATGTGT GAAGTCGGCT TAACGCAGCA CAGTGGCATT TCCTACCGCC ACTTAGCGTA TTTGCTCGAA GAGTGCAGCC GCTAA
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Protein sequence | MSINYDAVYK ELIQQLGESA VSNDPVRRFA WSTDASYFRI VPEIVVHADS LEQAKQTLAI ARAHKVPVTF RAAGTSLSGQ AIGEGILLIL GHDGFRTIEI SSDSNKITLG AAVIGADANA ALKPLNKKIG PDPATLASAM VGGIVSNNAS GMCCGTAQNS YQTIASAKLL FADGTELNTG CDKSKAAFTQ SHGELLDSLA SLAKLTRSNE VLAQRIRKKY SIKNTTGYSI NALVDFEDPF DLINHLIVGA EGTLAFVEEV TYHTVDEAKF KASAMAVFFN MVDAASAIPP IIGDSVAAAE LLDWASIKAV TGKKGMPDWL NELPEGAAIL LIESRANDAQ TLESYTQDVI AKLAHIKTER PISFSSDANV YSKYWAMRSG LFPIIGGERP KGSSVIIEDV AFNVEHLAAA AADLTELFHK HGYPEGVIYG HALAGNFHFI ITPTFASQAD IERFQGFMQD VAEMVIHKYD GSMKAEHGTG RAVAPFVEME WGADAYTLMK RIKHIFDPEG LLNPGVILND DSTVHVKNIK PCPVVDDFVD KCIECGFCEK TCPTSALNFS PRQRIATLRE IERLEQSGDK AAADKMRADA KYDVIDTCAA CQLCTIACPV DNSMGQLVRK LRTPYISTTE QKVLDFQAKH FGAVNQVIST GFDVLGVIHK ITGDGITNAL MKTGRLLSKE VPYWNPDFPK GGKLPKPSPA KAGQETVVYF PACGGRTFGP TPKDPDNRTL PEVVVTLLER AGYNVITPEK TRDLCCGQMW ESKGDFKNAD AKRQELIDVV SKMSHGGKIP VLVDALSCTY RTLTGNPQVQ ITDLVEFMHD KLLDKLSINK KVNVALHLGC SARKMKLEPK MQAIADACSS QVLKPAGIDC CGYAGEKGLY KPEINASALR NIKKLIPVEI KEGYYANRMC EVGLTQHSGI SYRHLAYLLE ECSR
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