Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2732 |
Symbol | |
ID | 4253303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3261047 |
End bp | 3261658 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119367 |
Product | heat shock protein GrpE |
Protein accession | YP_734860 |
Protein GI | 113971067 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000369534 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.883865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACG AGTCGATTAA AGCAGAACAG GATCTGATCC AAGAGGGTGT AGAGTCTGAA GTTTCTACCG AAGAAGCGAG TCTGATTGAC GAGCTTACCC AAGCCAATTT CCGTATTGAA GAGCTGGAAC AGTTACTCGC TGACGCTTTG GCGAAAGTTG AAGAGCAAAA AGATTCAGTT ATCCGTGCTG CTGCTGAAGT AGACAACATT CGTCGTCGCG CGGCGATGGA TGTGGAAAAG GCTAACAAAT TTGCATTGGA AAAATTCGCC AACGAATTAC TGCCAGTGTT AGACAATATG GAACGTGCAC TGCAAGGCAC CAATCCGCAG GATGAAACCA CCAAGGCGAT TTACGAAGGT GTTGAGCTCA CGCAAAAGAG CTTGTTAACC GCCGTGGCTA AGTTTGGGGT AAAACCTATC GATCCACAGG GTCAAGCCTT CAACCCTGAC CAACATCAAG CTATTGGTAT GCAGCCAAGT GCTGAATTCC CTGCCAATAC CGTGATGTTA GTGATGCAAA AGGGTTATGA GCTAAACAGC CGTTTACTGC GTCCAGCCAT GGTCATGGTG TCACAGGGCG GCCCTAGCCA AGAAATCAAC ATTGAAGCCT AA
|
Protein sequence | MSNESIKAEQ DLIQEGVESE VSTEEASLID ELTQANFRIE ELEQLLADAL AKVEEQKDSV IRAAAEVDNI RRRAAMDVEK ANKFALEKFA NELLPVLDNM ERALQGTNPQ DETTKAIYEG VELTQKSLLT AVAKFGVKPI DPQGQAFNPD QHQAIGMQPS AEFPANTVML VMQKGYELNS RLLRPAMVMV SQGGPSQEIN IEA
|
| |