Gene Shewmr4_2722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2722 
Symbol 
ID4253293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3251607 
End bp3251999 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content54% 
IMG OID638119357 
Producthypothetical protein 
Protein accessionYP_734850 
Protein GI113971057 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000162987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0799022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAG GATTGTTGTT ACTCGCCGCA GTAAGCGGAT TTTTTGCGGT CGCGCTAGGC 
GCCTTTGGCG CCCATGGACT CAAGGCTGTC GCACCGCCTG AGCTGATTGA GGTGTTTAAT
CTGGGGGTGC AATATCACTT CTATCATACC TTTGCGCTGA TTGCCGTGGC CTTTGCTGGG
CAGTGGTTAA CCTCACGTTT GCTGGATTGG GCGGCGTACC TGTTTATGGC CGGTATTGTG
CTGTTTTCTG GCTCGCTTTA CGGTTTGGCG CTGGTCGGTA GCAAATGGTT TGGCCCTATC
ACGCCGATGG GCGGTGGCTG TTTCCTCTTA GGTTGGTTAT TGCTGGCCGC GGCTGTATGG
CGCCATAAAG TGGTGGATGG TAACGAGTCA TAA
 
Protein sequence
MRKGLLLLAA VSGFFAVALG AFGAHGLKAV APPELIEVFN LGVQYHFYHT FALIAVAFAG 
QWLTSRLLDW AAYLFMAGIV LFSGSLYGLA LVGSKWFGPI TPMGGGCFLL GWLLLAAAVW
RHKVVDGNES