| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2709 |
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| Symbol | |
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| ID | 4253280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3231246 |
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| End bp | 3231935 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119344 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_734837 |
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| Protein GI | 113971044 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000407229 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000263688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTGCAA GGATATTGAT AGTAGAAGAC GAGTTAGCCA TCCGCGAGAT GCTGACTTTT
GTAATGGAAC AGCATGGGTT TACAACCTCT GCGGCGGAAG ATTTTGATTC GGCCATTGCG
CTGCTAAAGG AGCCTTACCC CGATCTGATT TTGTTGGATT GGATGTTTCC TGGTGGAAGT
GGTATTCAAT TGGCCAAACG CCTCAAGCAG GATGAATTTA CCCGTCAGAT CCCCATTATT
ATGTTAACCG CTCGCGGTGA AGAGGAAGAT AAGGTTAAGG GACTCGAAGT GGGCGCCGAT
GACTATATCA CTAAACCTTT TTCACCCAAG GAGCTGGTGG CGCGTATCAA GGCCGTATTG
CGCCGTAGCG CACCGACCCG CCTCGAAGAA ACCATCGATG TACAAGGATT GTTACTCGAC
CCCGTGAGCC ACAGGGTGAG TGTTGGCGAT ACCGTGCTCG ACATGGGGCC AACGGAATTC
CGTTTATTAC ACTTCTTTAT GACACACCCT GAACGTGTTT ACAGCCGCGA ACAGCTGCTC
GATAACGTCT GGGGAACCAA TGTGTATGTG GAAGATAGAA CCGTCGATGT TCACATCCGT
CGCCTGCGTA AAGCGGTCGA AGAGTCGGGC CATGACCGCC TCATTCAAAC GGTTCGTGGG
GCTGGTTATC GTTTCTCTAC ACGCATTTAG
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| Protein sequence | MTARILIVED ELAIREMLTF VMEQHGFTTS AAEDFDSAIA LLKEPYPDLI LLDWMFPGGS
GIQLAKRLKQ DEFTRQIPII MLTARGEEED KVKGLEVGAD DYITKPFSPK ELVARIKAVL
RRSAPTRLEE TIDVQGLLLD PVSHRVSVGD TVLDMGPTEF RLLHFFMTHP ERVYSREQLL
DNVWGTNVYV EDRTVDVHIR RLRKAVEESG HDRLIQTVRG AGYRFSTRI
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