Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2708 |
Symbol | |
ID | 4253279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3229867 |
End bp | 3231165 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119343 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_734836 |
Protein GI | 113971043 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000004963 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000358257 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTCGACT CTTATTCAGG GTACCGGTTG TTTTCGCGCT TAGCGGTGTT CTTACTGCTT TGTTTGCTAA TTGGTTTATT GGTAGGGAAA CCCCTCTGGA TACTTATCAT CGGATTGCTT GGACTGGTGT TCTGGCATTA CCGTCAGTTA GCTCGTCTCA ATTTTTGGTT ATGGCGTGAT AGAAAATTAA CGCCTCCCCA GGGCAGTGGT AGTTGGGAAG GGGTGTTTAA CGGCATATAT CGTCTGCAAG GTAAAAATCG TCGTCGAGTT GGCCAATTAG CCGCCTTGCT AGGACGTTTT CGCCAAGGCG CCGAGGCCTT GCCCGATGCG GCAGTCGTGC TCGACTCAGA GCACAATATC TTATGGTGTA ACAAGTTAGC TCAGCTGATT TTAGGCTTTG TCTGGCCACA GGATAATGGT CAACGGATTG ATAACTTGAT CCGTCATCCT GATTTTTCCG CCTATCTTAA GGCGGGAGAA TATAAGGAGC CCTTAGAGCT GGCCTCACCT GTCTCGGATA GGCGCCTACT CGAAATTCGT ATCATGTCCT ATGGTGATAG GCAGCTACTG TTGATCGCCC GTGATATTAC GCGGATAAGA CAGCTCGAAG GCATGCGTAA AGAATTTGTC GCCAATGTGT CACACGAACT GAAAACCCCG CTCACCGTAT TGCAGGGCTA TTTAGAGATG ATGCAAAGCA TGGCCGAACC CGGTTCGATG AACGCCAAGC CCTTAGCCTT AATGCAGCAA CAGACACGGC GAATGCAGTC GATGGTGGAG CAGCTGTTGG TGTTATCACG TATCGAAGAT GCGGTCGATA TAAACCTTGA GAATACGGTG AATATGGCGC AGTTGATGGA GGTCTTGAAG GAAGAGGCCA AGGCGCTGGC GCAGGATAAG TATGAACTTA GCTTCCATTG TGAGGCGGGA CTCAACTCCC ATGGCAATGA GTTACAGCTT AGAAGTGCTT GTTCTAATTT GATTTCGAAT GCGATTCGCT ACACAGAACC CGGCGGCAAA ATTACCGTGC AATGGCGCAG TGTGGCGACC GGTGGTCTCT TTAGTGTGAC GGATACGGGC GAGGGGATTG CGCCGCAGCA TATTAACCGT TTAACCGAGC GCTTTTATCG CGTCGACAGT GCGCGCTCAA GGCAAACGGG TGGTAGTGGC CTTGGTTTAG CTATTGTGAA ACATGCCCTG AGTCACCACC ACAGTGAGCT CAATATCAGT AGTGAATTGG GCAAAGGCAG CACCTTTAGC TTTGTGATCC CACACCATTT AATCGTCCGT AAAAAATAA
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Protein sequence | MFDSYSGYRL FSRLAVFLLL CLLIGLLVGK PLWILIIGLL GLVFWHYRQL ARLNFWLWRD RKLTPPQGSG SWEGVFNGIY RLQGKNRRRV GQLAALLGRF RQGAEALPDA AVVLDSEHNI LWCNKLAQLI LGFVWPQDNG QRIDNLIRHP DFSAYLKAGE YKEPLELASP VSDRRLLEIR IMSYGDRQLL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQSMAEPGSM NAKPLALMQQ QTRRMQSMVE QLLVLSRIED AVDINLENTV NMAQLMEVLK EEAKALAQDK YELSFHCEAG LNSHGNELQL RSACSNLISN AIRYTEPGGK ITVQWRSVAT GGLFSVTDTG EGIAPQHINR LTERFYRVDS ARSRQTGGSG LGLAIVKHAL SHHHSELNIS SELGKGSTFS FVIPHHLIVR KK
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