Gene Shewmr4_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2702 
Symbol 
ID4253273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3222539 
End bp3223078 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content45% 
IMG OID638119337 
ProductYfaZ family protein 
Protein accessionYP_734830 
Protein GI113971037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000258539 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000794475 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGT TCAGAGTAGC AAGTGTCTTA TTATTGAGTG CAGCCGCGCT GCAGGTGAAT 
GCGTCAGAAT TTAATCTTGG GTTAAACAAC GATGTGGTCT CTACCGAGTT AGAGCTGCAA
GTGAATAAAG ATGTCAATGC AGTATTAGGA TATATTTATT CAGATGATAG CGGTCATATT
GCCCAAGGCG CAATGCACAT GACCCATGAT GTGGGTGTGC ATCATTTTGA AGTTGGCGCT
AAGTTAAGCC AGTTATGGGC AGATGATGCG CCAAATGGTA GCGCTATATC CGTAGGTGGA
CGTTATGCCT TGGCGTTAGG GCCAAACATC TCTTTGCATG CCGCGGCTTA CTATGCGCCA
TCGGTATTGT CTTTCGGTAA TGTCGATGGT CAATACGAAT TGGATTCAAA GGTGCAGTAC
CGTGTGAATC CTAATATGGC GTTCTATGTC GGTTACCGTA AGATTGCCTT CGAATATGAT
AACGCCCGTG ATTTTACCTT CGAAGATGGC GTTTACATCG GCGGTAAGTT CCGCTTCTAA
 
Protein sequence
MAKFRVASVL LLSAAALQVN ASEFNLGLNN DVVSTELELQ VNKDVNAVLG YIYSDDSGHI 
AQGAMHMTHD VGVHHFEVGA KLSQLWADDA PNGSAISVGG RYALALGPNI SLHAAAYYAP
SVLSFGNVDG QYELDSKVQY RVNPNMAFYV GYRKIAFEYD NARDFTFEDG VYIGGKFRF