Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2702 |
Symbol | |
ID | 4253273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3222539 |
End bp | 3223078 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638119337 |
Product | YfaZ family protein |
Protein accession | YP_734830 |
Protein GI | 113971037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000258539 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000794475 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAAGT TCAGAGTAGC AAGTGTCTTA TTATTGAGTG CAGCCGCGCT GCAGGTGAAT GCGTCAGAAT TTAATCTTGG GTTAAACAAC GATGTGGTCT CTACCGAGTT AGAGCTGCAA GTGAATAAAG ATGTCAATGC AGTATTAGGA TATATTTATT CAGATGATAG CGGTCATATT GCCCAAGGCG CAATGCACAT GACCCATGAT GTGGGTGTGC ATCATTTTGA AGTTGGCGCT AAGTTAAGCC AGTTATGGGC AGATGATGCG CCAAATGGTA GCGCTATATC CGTAGGTGGA CGTTATGCCT TGGCGTTAGG GCCAAACATC TCTTTGCATG CCGCGGCTTA CTATGCGCCA TCGGTATTGT CTTTCGGTAA TGTCGATGGT CAATACGAAT TGGATTCAAA GGTGCAGTAC CGTGTGAATC CTAATATGGC GTTCTATGTC GGTTACCGTA AGATTGCCTT CGAATATGAT AACGCCCGTG ATTTTACCTT CGAAGATGGC GTTTACATCG GCGGTAAGTT CCGCTTCTAA
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Protein sequence | MAKFRVASVL LLSAAALQVN ASEFNLGLNN DVVSTELELQ VNKDVNAVLG YIYSDDSGHI AQGAMHMTHD VGVHHFEVGA KLSQLWADDA PNGSAISVGG RYALALGPNI SLHAAAYYAP SVLSFGNVDG QYELDSKVQY RVNPNMAFYV GYRKIAFEYD NARDFTFEDG VYIGGKFRF
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