Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2691 |
Symbol | |
ID | 4253262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3209497 |
End bp | 3210033 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638119326 |
Product | MarR family transcriptional regulator |
Protein accession | YP_734819 |
Protein GI | 113971026 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00759324 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAAAA AACCGCAATC ACCCGGCGCA AAGCAACAGT CGACTCCCGC TGAAGACGGA TTGGATAACA TCCTTGGGCA GTGGCAGGCT CAAGGGGTGA CAGAGGATCT AGTGCCAATG GCGGTGTTAG GGCGCATCGC GCGCCTGACC AAATATATGG AAAACGCTAT CGCCCTGTGC CATGGCGAAT TTGGCTTAGG TCAGGGGGAG TTTGATGTGC TCGCGACCCT CAGACGTTCG GGCGAGCCTT ATATGCTATC GCCTTCGCAG CTGTATCAGA GCATGATGTT AAGCTCTGGC GCCATGACCA GTCGCTTAGA CCGGCTTGAA AATAAAGGGC TGATTGCCCG TGAGCACAGT AAGGAAGATC GCCGCGCCGT GCATGTGTCG CTCACCACCG AAGGCAAGGC GTTGATTGAT GCGGCGCTGC CCAAACATAT TCAATGCCAA AGCGCATTAT TGGCAGGGGT GCCGAGTGCC GAGCGCGAAA CATTGCAGCA GATTTTAAAG ACGTGGCTTG CTCACTTTGA ACGTTAA
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Protein sequence | MDKKPQSPGA KQQSTPAEDG LDNILGQWQA QGVTEDLVPM AVLGRIARLT KYMENAIALC HGEFGLGQGE FDVLATLRRS GEPYMLSPSQ LYQSMMLSSG AMTSRLDRLE NKGLIAREHS KEDRRAVHVS LTTEGKALID AALPKHIQCQ SALLAGVPSA ERETLQQILK TWLAHFER
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