| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2648 |
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| Symbol | |
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| ID | 4253219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3154997 |
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| End bp | 3156478 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119283 |
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| Product | PTS system, glucose-like IIB subunint |
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| Protein accession | YP_734776 |
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| Protein GI | 113970983 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAA AGCTGGAATC AAATCGTCAA ATCCGAACGC GCCGCTTAGG TCATTTCGTT
ACTCAGCAGT GGTTTAAATT TGCCCAGCGC CTAAGTCAGG CGCTGTTAAT CCCGATTGCG
ATTTTACCGG CCGCGGGTGT GATGCTGGGC TTAACCGTGA GTCCAATCCC TTTTATGCCC
GAGGTGCTAA CCGTACTAAT GCTGGCGGTT GGCAAACTGA TTTTCGCCAT CATGCCCATT
TTGTTTGCGG TGGCGGTGGC GATAGGGTTT TGCCGCGATC AAGGTATCGC CGCTTTTACT
GCCGTATTTG GTTATGGGGT GATGACGGCC ACCTTAGCCG CGTTAGCGGA TCTCTACCAA
CTGCCAACCC AATTACTACT CGGCATGGAA ACCTTAGACA CAGGCATTGC TGGCGGCATG
TTAATAGGTG GCGTGACTTG CTTTGCCGTG CGCTGGAGCC AATATATTCG CCTGCCGGCG
ATTTTCTCCT TTTTTGAGGG GCGACGTAGT GCTTCTTTAT TGATCATTCC GTTGGCTATG
GGCTTAGGTT ATATCCTTGC CCATGTGTGG CCGCCGTTAT CTCTGCTCAT CGAGCGTGTG
TCCGACTGGG CGGTTTACCA AAAGCCGGCC ATTGCCTTTG GGGTCTATGG TGCGCTCGAA
CGTTTACTCA TTCCCCTCGG TTTGCATCAT ATCTGGAATG CGCCTTTCTA TTTAGAAGTT
GGCCAATACC AGTTACAGAA CGCTGAAGTG GTTCGGGGTG AAGTGGCGCG CTATTTAGCC
GGCGATCCGC AGGCGGGGAA TTTAGCTGGC GGTTATTTGA TTAAAATGTG GGGACTCCCC
GCGGTGGCGC TGGCCATTTG GCGCTGCGCC GATCCCTCAG AGCGTAATCG GGTCGCGGGT
ATTATGCTTT CCGCGGCGGC GGCCAGTTGG CTGACCGGAG TCACTGAGCC AATTGAGTTC
GCCTTTATGT TTGTGGCACC TATCCTGTTT CTTATCCATG TGTTGTTGTC GGGGCTGGCA
TATTTTGTCT GCATCATGCT CGATATTCAC CACAGTATTG TGTTCTCTCA TGGGCTGGTG
GATTTCACGC TGCTGTTTTC CCTCTCGCGC AATACGGGTT GGTTTGCATT CTTAGGGCCG
CTGACGGCGG TGATTTATTA CCTGCTGTTT AGGGGCAGTA TTCTGGCATT TAATTTAAAG
ACGCCAGGAC GACTCGAACC CGATGAACCC CATGGTGCCA AAGAGAGTTT AAGGGCCATC
ATTGCGGCAT TGGGCGGTCG TGAGAATATT GTTGAGCTTA ATGCTTGTCT TACCCGGTTA
CGCTTGAGTG TGCACAGCCC TGAGCTCGTC AATAAAGTGC GGCTCAGCCA GCTGGGTGCT
AAGGGCGTGA TTGTGATGGG CAAAGGCGTG CAAGTGGTGT ATGGCACCAA AGCCGAAACC
CTACGCAAAG TCTTACAGCG CTATTTAGAT ACCCGGCGTT AA
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| Protein sequence | MAGKLESNRQ IRTRRLGHFV TQQWFKFAQR LSQALLIPIA ILPAAGVMLG LTVSPIPFMP
EVLTVLMLAV GKLIFAIMPI LFAVAVAIGF CRDQGIAAFT AVFGYGVMTA TLAALADLYQ
LPTQLLLGME TLDTGIAGGM LIGGVTCFAV RWSQYIRLPA IFSFFEGRRS ASLLIIPLAM
GLGYILAHVW PPLSLLIERV SDWAVYQKPA IAFGVYGALE RLLIPLGLHH IWNAPFYLEV
GQYQLQNAEV VRGEVARYLA GDPQAGNLAG GYLIKMWGLP AVALAIWRCA DPSERNRVAG
IMLSAAAASW LTGVTEPIEF AFMFVAPILF LIHVLLSGLA YFVCIMLDIH HSIVFSHGLV
DFTLLFSLSR NTGWFAFLGP LTAVIYYLLF RGSILAFNLK TPGRLEPDEP HGAKESLRAI
IAALGGRENI VELNACLTRL RLSVHSPELV NKVRLSQLGA KGVIVMGKGV QVVYGTKAET
LRKVLQRYLD TRR
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