| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2631 |
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| Symbol | lpxD |
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| ID | 4253202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3134903 |
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| End bp | 3135928 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119266 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_734759 |
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| Protein GI | 113970966 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000719078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.149676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTG TGACTTTAAA AGAGCTAAGC CTGTTATTAG ACGGCGTTGT CCAAGGCGAT
GAAACGTTAG TGATCAACAG CGTTGCGACA CTTGAACATG CCACAGCGGG ACAAATCTCT
TTTTTAGCCA ACAGCAAATA CCGTGCTCAG CTTGAGTTAA CTCAAGCGAG TGCGGTGTTA
TTGTCGGCTA AAGATGCGCA GGACTATTCT GGCACTGCGT TAGTAGTAAA AGATCCCTAT
GTAGGGTTTG CCCGTGTGGC ACAGTTGTTA GATACCACGC CTAAGGCGGC CATAGGTATC
CATCCTTCGG CACAAATCGA TCCTTCCGCC CTGTTAGGTG AAGGGGTGGC TATCGGTGCT
AATGCGGTGA TCGGCGCCAA TGTGATCCTC GGTGAAAACG TCCAGATTGG TGCGGGCACT
GTGATTGGTC AAGACTGCAT TATAGGTTCA AATACCCGCC TGTGGGCCAA TGTGACCCTG
TATCACAACG TCCATTTAGG CCAAGATTGT ATTATCCATT CCGGCGCGAT TATTGGTTCC
GACGGTTTTG GTTACGCTAA TGAGCGCGGA CAGTGGATTA AGATCCCGCA AACTGGTGGT
GTGCGCATTG GTGACCGAGT CGAAATCGGT GCTAGCTCAA CTATCGATCG CGGCGCCTTG
GGTCATACTG AGATCCACAA TGGTGTGATC ATCGACAACC AAGTGCAGGT TGCCCATAAC
GATATCATTG GTGAAAATAC CGCGATTGCT GGCAGCACCA CACTTGCTGG CAGTGTTACT
ATTGGTAAAC ATTGTATTAT TGGTGGTAAT TGCGCGATTG CTGGCCATTT AACTATTGCT
GATGGTGTCC ATCTTTCTGG CGCGACAAAT GTTACTGGCA ATATGCGTGA GCCTGGTTTG
TATTCTTCTG CGACAGTCGC AATGGAAAAC AAAGTATGGC GTAAAAATAC AGTTCGCTTC
CGTCAATTGG ATGAACTGTT CCAACGCGTG AAGACGTTGG AAAAGAATTC AAATACACCA
GAGTAA
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| Protein sequence | MKSVTLKELS LLLDGVVQGD ETLVINSVAT LEHATAGQIS FLANSKYRAQ LELTQASAVL
LSAKDAQDYS GTALVVKDPY VGFARVAQLL DTTPKAAIGI HPSAQIDPSA LLGEGVAIGA
NAVIGANVIL GENVQIGAGT VIGQDCIIGS NTRLWANVTL YHNVHLGQDC IIHSGAIIGS
DGFGYANERG QWIKIPQTGG VRIGDRVEIG ASSTIDRGAL GHTEIHNGVI IDNQVQVAHN
DIIGENTAIA GSTTLAGSVT IGKHCIIGGN CAIAGHLTIA DGVHLSGATN VTGNMREPGL
YSSATVAMEN KVWRKNTVRF RQLDELFQRV KTLEKNSNTP E
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