| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2625 |
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| Symbol | |
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| ID | 4253196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3126665 |
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| End bp | 3128062 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119260 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_734753 |
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| Protein GI | 113970960 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0104928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCGG TGGATCTTTG TGCCCATATA GCGCGATTTT TAGCGAGCTT ACCTCTGCAA
ACGGGGAGCA AGTTAGTCCT CGCTTACAGT GGCGGCGTCG ATTCCGAAGT GCTCGCCTAC
GGTTTGAGTG AATTCGCCAA ACATCACCCC GAGTTACATT ATCAATTGAT TTATGTGCAC
CATGGCTTGA GCCCTAATGC CGATGCTTGG GCCAAGCACT GCCAAACTCG CGCCGCCAGT
TACGGTTTGC CTATCACAGT CGAGCGGGTG CAACTGACCC TAGGGCCGAG AGTGAGTGTT
GAAGCCGAGG CGCGAAGAAT GCGTTATCAG GCGATATTAC AGCACCTTAA GCCTCAGGAT
GTGCTGCTGA CCGCCCACCA TGAAGACGAT CAACTCGAGA CGATTCTCCT CGCCCTCAAA
CGCGGTCAGG GCCCCAAAGG ATTAGCCGCC ATGGGGCAAA TCCAAATGCT CTCTCTCGGC
GAGAAGGGGA CTTGCTTGCA GGCTCGGCCC TTGCTCGATA TTAGCCGTGA GCAGATTGAA
GTTTTCGCTC AAACGCGGCA GTTAGTGCAT ATCGAAGATG AAAGTAATCA AGACGATAAA
TACGATCGTA ACTTTTTACG CCTCGAGATT ATCCCACGCC TAAAAGCGCG TTGGCCCAGT
ATTGCCACTA CCGCAAGCCG CAGCGCCCAG CTCTGCGCCG AGCAGCAGGC CATAGTGGAT
GCCGAGGTGA GTGAGCGTTT ACCTAAGCTG TTAACCGAGG CGTCCTTTAC CCAGCAAACC
GTGCTTAAGC TTGATGCGCT CTCTACGCAA ACCAGCGAAT GGCAAGGATT ACTGCTGCGG
GGTTTTATCG AATCCCAAGG CTTTGCATTG CCTTCCTATG TGCAGCTGCA GCAAATTCTG
CAGCAGTTAA TGGGAGCAAA AGAGGATGCC AAAGTGCAGA TCCAAATTGG TGACTGTGTG
CTGCGCCGCT TCGCTGGGAT GCTTTATCTG GATACGGTAA GCACTGTATC CGCCGCGCCG
CGAATCACAG CGCGTAAACT GCATCATGAT ATTCAGGCTT TACTGACTCA AGCATCAACA
ATGGTTGAAG ACAAGATTGC GCCATTTACC TTGGCTACAA CTGGCCCTCG GCTGCGTTTA
CCCAATGCGG ATGAGGTGGT GAGCCTGCGT TATCAGTTGC CGGGGCAATT TCGCTGTCAG
CCGCATTTTC GTGATAAGGG CCGTGAGCTT AAAAAACTCT GGCAAGAATG CGCTGTGCCG
CCATGGTTAC GTGCCGATGT GGGGTTCTTG TTCTATAACG AGCGTTTAGT GATGGTGCTG
GGGCTTTGGG TCGAAAAGCC ATTTTGTGCC CAAGGGGATG ATGTCGGGCT TAAGTTTGAT
GGGCATGCAA TCGGATAG
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| Protein sequence | MVAVDLCAHI ARFLASLPLQ TGSKLVLAYS GGVDSEVLAY GLSEFAKHHP ELHYQLIYVH
HGLSPNADAW AKHCQTRAAS YGLPITVERV QLTLGPRVSV EAEARRMRYQ AILQHLKPQD
VLLTAHHEDD QLETILLALK RGQGPKGLAA MGQIQMLSLG EKGTCLQARP LLDISREQIE
VFAQTRQLVH IEDESNQDDK YDRNFLRLEI IPRLKARWPS IATTASRSAQ LCAEQQAIVD
AEVSERLPKL LTEASFTQQT VLKLDALSTQ TSEWQGLLLR GFIESQGFAL PSYVQLQQIL
QQLMGAKEDA KVQIQIGDCV LRRFAGMLYL DTVSTVSAAP RITARKLHHD IQALLTQAST
MVEDKIAPFT LATTGPRLRL PNADEVVSLR YQLPGQFRCQ PHFRDKGREL KKLWQECAVP
PWLRADVGFL FYNERLVMVL GLWVEKPFCA QGDDVGLKFD GHAIG
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