| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2587 |
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| Symbol | |
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| ID | 4253158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3080872 |
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| End bp | 3083148 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119222 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_734715 |
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| Protein GI | 113970922 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0901243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA TAAAACTCTA TGTCGCCACC ATGAATTGTG CAGGCTGTGT GGCCAAAATT
GAAAAGGCCT TCGCGGCCGA GCCGAATGTG AGTGCCCGTA TCAATCTCGC CGATAAGCAA
GTGACTGTGG ATGGCAAGAT GAGCAGCGAT GCGGCGCTGG CAGTGATGGA TAAGGCGGGC
TATCCTGCCC AGTTGATTGT GGACGCAAAG GCAGCCGCTG AGGAAAAGCG GGTCGAAGAT
GCGGCGGAGT ATCGCCTGCG GATGCGTCAG GCCATCGCCG CGCTCGCTGT CGGTATCCCT
ATGATGTTAT GGGGATTACT GGGCGGCGAA ATGATGATTA ATAGCCCTAA CATGCAGCTT
GGCTGGGGCA TTATGGGCTT AGTCACCCTA GCACTTTTAG TCGGTACCGG GCGCCATTTC
TATCAGGGAA TGTGGCGTGC GCTTAAAGCC AAAACCACCA ATATGGATAC TTTAATCGTG
TTAGGCACCA GTACGGCATG GCTCTATTCC ATGCTGGTGG TGCTTATCCC GAGTGCGTTC
CCAATAGACA CTCGCCACGT GTACTTTGAG GCGAGCGTGA TGATCTTAGG CTTGATTAAC
TTAGGTCACG CCCTCGAGCT GAAAGCTCGG GGCAAGACCA GCGAAGCGGT GCAGCGCTTA
CTCGGTCTGC AATCTTCTAC CGCAATCCGT ATTGGCGACA ATGGCGATGA AGAGGTGGAA
ATCGATAAGC TTAAATTGGG GGATAAACTC AGACTTCGCC CCGGTGACAG GGTCGCACTC
GATGGCGTGG TGGAGTCCGG CCAGTCATTA CTCGATGAGG CCATGCTGAC GGGTGAACCT
ATTCCCGTAC CTAAGCATGT TGGCGATAAT CTCAGTGCGG GGACAGTCAA TGGTAACGGT
AGTTTAGTCT ATCGGGTGAC CGCGGGGCAG CAGGATACAC GCCTTGCCAA AATTATTGCA
CTGGTGCAGG AGGCGCAAAC CTCTAAAATG CCGATTGGTC GTCTGGCCGA TAAAATTTCG
GCGGTATTTG TGCCAACGGT CGTGGTCATC GCCTTACTCG CGGCGGCGAT TTGGTATTTT
GTAGGGCCAG AACCCGCGCT CAGCCATGCG CTTGTGGTGC TTACCAGCGT GCTGATCATC
GCCTGTCCCT GCGCCTTAGG CTTAGCGACA CCTATGTCTA TCATGGTGTC CGTTGGCCGC
GCCGCTCAAA TGGGCATCTT GGTTAAAAAT GGTGAGGCAC TGCAAAGCGC CAGCAAGGTC
GATTGCGTGG TGCTGGATAA AACCGGCACA GTGACTCAGG GTAAACCCCA AGTGACTGAT
ATCCATTGGA TTGAAGGTAA TGACCAAGCT CCTAATGACC AAGCACTCAG TGATGAAGAC
AAGCGCGCAC TGCTTGGCGC TATCGCCAGT CTTGAGCAGC ATTCGGAGCA TCCGCTGGCC
AGCGCAATGG TTAGTTATGT TAAGCAAGCC TCGATTCCAT TGCCCGTGAC CGAGATTTTT
ACCAATCATC AAGGTCAGGG CATCGAAGGG CGAGTTGATG GCGCCGACTT TTTAGTGGGC
AATCAAGCCT TAATGGCGGC ATTTGATGTG CAGTCAGAGA AGGGCGTGAC AGGCAGCCAC
TCAGGCTTTG CGGTAGAAGC CGCCGCGCAA TTTGCCAAAC AGGGCAAGAC GGCGATTTAT
GTCGCCAAGG CGGGCAAGTT AGTGGCCACT ATCGCCATTG CCGATCCGAT CAAGGCCGAC
GCCAAAGACG CGATCAGCGC CATCCGTTCA CAGGGGATTC GTGTGGTGCT GCTGACCGGA
GATAATCCGC AAACGGCGCA GGCGGTAGCC GCTCAAGTGG GCATAGAGGA AGTGATTGCG
GGCGTATTGC CCGAGCAAAA GCTGCAGCAT ATTAAAGCCT TACAACAGCA AGGCCATGTG
GTTGCTATGG TGGGGGACGG TATCAACGAT GCGCCCGCCC TGATGAGCGC CGATGTGGGG
ATCGCCATGG GAACGGGCAC AGAGGTGGCG ATCGAAAGCG CGGATATGAC TCTGCTGTCC
CATCAGCTGA TAGTGATTGC TAACTTATTG GCACTTTCCC GCGCGACCAT TCGCAATATT
AAACAGAACC TGTTTGGGGC CTTTATCTAC AACAGTTTAG GTATTCCTGT GGCGGCGGGC
GTCTTGTATC CGCTCACGGG TATGCTGTTA AGCCCTGTGA TTGCCGGGGC GGCGATGGCG
CTGTCATCCC TAACTGTGGT CACCAATGCG AATCGATTAA GACAGCAAAA GTTATAA
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| Protein sequence | MSQIKLYVAT MNCAGCVAKI EKAFAAEPNV SARINLADKQ VTVDGKMSSD AALAVMDKAG
YPAQLIVDAK AAAEEKRVED AAEYRLRMRQ AIAALAVGIP MMLWGLLGGE MMINSPNMQL
GWGIMGLVTL ALLVGTGRHF YQGMWRALKA KTTNMDTLIV LGTSTAWLYS MLVVLIPSAF
PIDTRHVYFE ASVMILGLIN LGHALELKAR GKTSEAVQRL LGLQSSTAIR IGDNGDEEVE
IDKLKLGDKL RLRPGDRVAL DGVVESGQSL LDEAMLTGEP IPVPKHVGDN LSAGTVNGNG
SLVYRVTAGQ QDTRLAKIIA LVQEAQTSKM PIGRLADKIS AVFVPTVVVI ALLAAAIWYF
VGPEPALSHA LVVLTSVLII ACPCALGLAT PMSIMVSVGR AAQMGILVKN GEALQSASKV
DCVVLDKTGT VTQGKPQVTD IHWIEGNDQA PNDQALSDED KRALLGAIAS LEQHSEHPLA
SAMVSYVKQA SIPLPVTEIF TNHQGQGIEG RVDGADFLVG NQALMAAFDV QSEKGVTGSH
SGFAVEAAAQ FAKQGKTAIY VAKAGKLVAT IAIADPIKAD AKDAISAIRS QGIRVVLLTG
DNPQTAQAVA AQVGIEEVIA GVLPEQKLQH IKALQQQGHV VAMVGDGIND APALMSADVG
IAMGTGTEVA IESADMTLLS HQLIVIANLL ALSRATIRNI KQNLFGAFIY NSLGIPVAAG
VLYPLTGMLL SPVIAGAAMA LSSLTVVTNA NRLRQQKL
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