Gene Shewmr4_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2573 
Symbol 
ID4253144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3061783 
End bp3062904 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content54% 
IMG OID638119208 
ProductABC-2 type transporter 
Protein accessionYP_734701 
Protein GI113970908 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGTA GAATTTGGGC CGTGGTCGTC AAAGAACTCA GGCAGCTATC GCGGGATCGC 
ATGACCTTCG GCATGATAGT GATGATCCCC TTAGTGCAGT TGATGCTGTT TGGCTATGCC
ATCAACACCG ATGCGCGCCA TTTGCCCGCA GGTTTAGTGA ACTTAAGCGA TTCCGCCTAT
AGCCTCGCCT TGGTCAAGGC GGTAGAAGCG ACTCAAGTCG TTGATTTTAA ACATCGGTAT
TTGAGTGCCG CCGAGGCGGA TGCGGCCATC ACTCGGGGCG AAGTGAAAGC CGTGCTGTAT
TTAGGCGCCG ATCTCGACGA GCGTTTAGTG CGACATCCCG CCTTTGCGGG GCAGGCCTAT
TTTGCCGAGC CTGTGGGGCA ATGGTTGGTA GATGGCTCGG ATACTGTGGT CGCCTCCACC
ATTCGCAGTT TAAGGCAAAT GCCACTGGAT GAAATTGCGG GCAGGGCGGT CAAATCGAAT
CCCCCCAGTT TTGAGGTGGT GCAGTATTTT AACCCTGAGC AGCGTTCTGT GGTGAATATC
GTCCCCGGCC TCTTGGGGGT CATTTTGACT ATGACCATGG TGATGTTTAC CTCGGCCGCG
ATTGTGCGCG AGCGTGAGCA GGGCAATATG GAGTTTTTAA TCACCACGCC GGTGAGGCCA
CTCGAGCTAA TGCTTGGGAA AATCACCCCT TATGTATTAG TGGGCTTTGT GCAATTGGCC
ATTATTCTCA CCGCCGGACA TTTACTGTTT GCCGTGCCGA TCCGCGGCGG TTTGGACTCG
ATTGCGCTGG CGGCCATGCT GTTTATCTGC GCCAGTTTGA CCTTAGGCCT AGTGATTTCG
ACCATAGCGA AAACCCAGTT ACAGTCGATG CAGATGACGG TGTTTATCCT GCTGCCGTCG
ATTCTGTTGT CGGGCTTTAT GTTTCCCTAC GAGGCCATGC CCGTGGCGGC GCAGTGGATT
GCCGAGGCGT TACCCGCGAC GCACTTTATG CGTATGTCCC GCGCGATTGT GCTGAGGGAT
GCCGAGGTGA GTGACTTGCA ATTTGATGCG CTGTGGATGA TTGGCTTTAC CTGTCTAGGG
CTGCTGGTGG CAAGCCTGCG ATTCTCCAAA CGTTTGGATT AA
 
Protein sequence
MLRRIWAVVV KELRQLSRDR MTFGMIVMIP LVQLMLFGYA INTDARHLPA GLVNLSDSAY 
SLALVKAVEA TQVVDFKHRY LSAAEADAAI TRGEVKAVLY LGADLDERLV RHPAFAGQAY
FAEPVGQWLV DGSDTVVAST IRSLRQMPLD EIAGRAVKSN PPSFEVVQYF NPEQRSVVNI
VPGLLGVILT MTMVMFTSAA IVREREQGNM EFLITTPVRP LELMLGKITP YVLVGFVQLA
IILTAGHLLF AVPIRGGLDS IALAAMLFIC ASLTLGLVIS TIAKTQLQSM QMTVFILLPS
ILLSGFMFPY EAMPVAAQWI AEALPATHFM RMSRAIVLRD AEVSDLQFDA LWMIGFTCLG
LLVASLRFSK RLD