| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2557 |
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| Symbol | |
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| ID | 4253128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3044033 |
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| End bp | 3044743 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119192 |
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| Product | transcriptional regulator PhoU |
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| Protein accession | YP_734685 |
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| Protein GI | 113970892 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.183587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA TGAATTTAAA CAAACATATC TCTGGGCAAT TTAACGCCGA GTTAGATGAT
ATCCGTAACC GTGTACTCGC CATGGGTGGC TTGGTTGAGC GTCAGTTAGA GCAAGCCATC
GACGCCTTAA GCACCTTAGA TGCCGAATTA GCGCAAAAGG TGATCACCGG CGATCACAAA
GTGAATGGCA TGGAAGTCTC GATTGACGAA GAATGCACCC GCATTATCGC TAAACGCCAA
CCGGCGGCGA GCGACTTACG TCTGATCATC GCGATTTCAA AATCGATTGC CGATCTTGAG
CGTATCGGTG ACGCCTGTGT GCGTATTGCC AAGGCTGCAT TAGATAAGCG TTTGAATAAT
CAGCAACCGT TATTAGTCAG CATTGAAAAT ATGGGCCGCC ATGCGATTCG TATGCTGCAC
GCAACGCTCG ATGCCTTAGC CCGTATGGAT GCCGATTCGG CGCTGGAACT TCATAAAGAA
GATGCCAAGC TCGACCGTGA ATATGAAGGC ATTATCCGTC AATTAATGAC CTACATGATG
GAAGATCCAC GCTCAATCCC CGATGTATTA GACGTACTCT GGGCAGCCCG TGCGGTTGAA
CGTGTAGGCG ATCGTTGTAA AAATATCTGC GAATACATTA TTTACTACGT GAAAGGTAAA
GACGTTCGCC ATACTTCCTA CGAAGATATG GAAAAGGATT TAAAGGACTA A
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| Protein sequence | MENMNLNKHI SGQFNAELDD IRNRVLAMGG LVERQLEQAI DALSTLDAEL AQKVITGDHK
VNGMEVSIDE ECTRIIAKRQ PAASDLRLII AISKSIADLE RIGDACVRIA KAALDKRLNN
QQPLLVSIEN MGRHAIRMLH ATLDALARMD ADSALELHKE DAKLDREYEG IIRQLMTYMM
EDPRSIPDVL DVLWAARAVE RVGDRCKNIC EYIIYYVKGK DVRHTSYEDM EKDLKD
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