Gene Shewmr4_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2554 
Symbol 
ID4253125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3040396 
End bp3040791 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content49% 
IMG OID638119189 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_734682 
Protein GI113970889 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000223181 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGA CCCGCCTAGA CCATTTAGTG TTAACCGTGA AAGATATCGA GGCCAGCGTC 
GACTTTTATC AACGCGTGTT AGGGATGAAA AAGTCCGTAT TTGGTCAGGG CCGTATCGCC
TTAAGCTTTG GCGATCAAAA AATCAATCTT CACCAAGCAG GTGCCGAATT TGAACCTAAG
GCAAACCTTG CCACTCCCGG CAGCGCCGAT CTCTGCTTTG TGGTCAGCCA CAATATCGAA
GAAGTAATCA ACCACTTAAA CACCCTTGAA GTTGAGATTA TTGAAGGCCC AGTACTGCGC
ACCGGCGCGA CAGGCCGCAT CAACTCAGTC TATATCCGCG ACCCCGATTT GAATCTATTG
GAATTATCCG AATATCTACC CGCCTGCGCG CTATAA
 
Protein sequence
MRVTRLDHLV LTVKDIEASV DFYQRVLGMK KSVFGQGRIA LSFGDQKINL HQAGAEFEPK 
ANLATPGSAD LCFVVSHNIE EVINHLNTLE VEIIEGPVLR TGATGRINSV YIRDPDLNLL
ELSEYLPACA L