| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2488 |
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| Symbol | |
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| ID | 4253059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2956309 |
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| End bp | 2957094 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119120 |
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| Product | ABC transporter related |
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| Protein accession | YP_734616 |
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| Protein GI | 113970823 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0320682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC CACTGCTTAA AGTTAACGAT CTCTTTAAGA GGTACGATAC CGGCTATAAA
GGCTTTACTC GCCAATATAA CGATGCCTTA GCACCGGTTT CATTTGAATT AAACCGCGGC
GAAACCTTAG CTATCGTGGG TGAAGCGGGT TCAGGTAAGA GTACTTTAGC GCGTATTTTG
GTAGGCGCAG AACCCCGCAG CGGCGGTGAA ATTTACTTTG AGGGCGAGGC GCTGGACAGC
CGCAATATTA AGCAGCGCTG CCGCCTTATT CGGATGATTT TCCAAGATCC CAATACCTCA
CTCAACCCAA GGCTCACCAT TGGTCAATTA CTGGATGAAC CGCTGCGCTT TAACACTGAG
TTATCCGCCA AGGAGCGTAA TGGCCAAGTG ATTGATACCT TGAGGAAGGT CGGTTTATTA
CCCGAGCATG CGGATTTTTA TCCCCATATG ATTTCCGAGG GGCAAAAACA GCGGGTTGCG
GTGGCACGGG CACTGATGCT CAATCCGAAA ATCATCATCG CCGACGAGGC TTTAACCGCC
TTGGATCTCT CGGTACGCTC ACAGATCCTT AATCTGCTGC TTAAACTGCA GAAGGACTTA
GGCTTGTCCT ATATCTTCGT GTCCCATAAC CTGAATATTA TTCGCCATGT CAGCGATAAA
ATTATGGTGT TACACAAAGG CGTGATGGTT GAGAAAGCCC CAACAGAACA GATATTTAAT
TCGCCTCAGC ACGAATATAC CCAAAGGCTG ATTCAGGAGC AGAGCCTGTT TGTTCATAAG
CGTTAA
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| Protein sequence | MTTPLLKVND LFKRYDTGYK GFTRQYNDAL APVSFELNRG ETLAIVGEAG SGKSTLARIL
VGAEPRSGGE IYFEGEALDS RNIKQRCRLI RMIFQDPNTS LNPRLTIGQL LDEPLRFNTE
LSAKERNGQV IDTLRKVGLL PEHADFYPHM ISEGQKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQIL NLLLKLQKDL GLSYIFVSHN LNIIRHVSDK IMVLHKGVMV EKAPTEQIFN
SPQHEYTQRL IQEQSLFVHK R
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