Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2470 |
Symbol | dinG |
ID | 4253041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2938352 |
End bp | 2940424 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119102 |
Product | ATP-dependent DNA helicase DinG |
Protein accession | YP_734598 |
Protein GI | 113970805 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00127477 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTACCTG ACAACGTAAA AAACCAGATC CGCGCTATCT ATAAAGATAT TGCCGCCGCT TTGCCTAATT TTAGGCCACG CCGCGAGCAA AATTTTATGG TGGCAGAAAT CTCTAAGACT CTTGCTGGCG ACTATGACAA AGATAGACGC ATCATAGTGG TCGAAGCGGG TACGGGGATT GGTAAATCAT TGTCTTATAT TTTAGGCACC ATTCCGCTTG CACTTGCGAG TAAGAAAAAG GTCTGTATCG CCACAGCAAC CGTGGCGCTG CAGGAGCAGT TACTGCACAA AGACTTACCG TTTTTTCTCG AACAATCAGG GCTAAACTTT CGCTTTGGTC TGGTAAAAGG GCGCCAGCGT TATGTCTGTT TATCCAAACT TGCCATGCTA ATCGGCGATG ATAACAGTAC CCAAATGGCC ATGTGGCAAA CAAAGCCAGA TAACAGCCAA ATTGCCATGT TGCAGGAGCT GCTAAGCGAC TTTAATGAAG GCCGCTGGAA CGGTGAAATC GATACGTTAT CGACACCGAT ACCGGACCAT CTCTGGCAAC AAATCGCCTG CGATAAACAC AGTTGTCATC GGCAACTTGC CAGTCATCGT AATTGCCCGT TTCACAAGGC CCGCGAGGAT GTGGACACTT GGGATGTACT GATCGCCAAC CACAGTTTGC TGTTTGCCGA CTTAGAGCTG GGGGGCGGGG TGATTTTGCC CGATCCCGAA GACGTATTTT ATGTCATTGA CGAAGCTCAC CACTTACCTA TCGTCGCCCG GGACTTTTCT AGCGCACAGG CAACGCTTAG AGGCGCCGCC GACTGGCTCG AAAAAGTCGG TAAGACCAGC GCCAAGTTAC AAAATCAGAT AAAGAGCAAC AATATCATTG CCCCAGCGCA GGCGATGCAG GATCATATCG GTGACTTAAT CGCTCAGCTC AATCAAGTCG CCCACTTCTG TGATACCCAG ACCAAGCAGT TTGCTAATCC TGAGAGCCGC TATCGGTTCG AACACGGCAA ATTGCCCGAT GCACTGAAAA TCCCCGCCGA GAATCTCGCG GCCACCTCCA ATCTTGCCCT CAAGCAATTT AACAAGATGC AATTATTGCT GGCTGAGGCG ATCAAAGATG GCGACATTCC TAAGCACCAA GCGGAAGCGC TACAGGCCGA AATGGGCTTT ATGTTGCAGC GACTCGAAAA CCTGCAAAAG CTCTGGAAAA TGATGGCAAA GGAAGATTCT ACTAAAGGCG CGCCCCTCGC CCGCTGGATT GAATTGCTCA CAGGCAAACA GGTCGATTAC TTGTTTAGCG CCTCGCCGAT TGAAGTTGGT TTTATGCTCG AATCCATGCT GTGGCAAAAG GCGGCTGGCG TCGTGCTGTG CAGCGCAACC CTGCGCGCGC TGAATAACTT CGACCATTTC GCCCATCAAG TGGGATTATC GGTAAAGGAC GGCAGTCGTT ATCTCGCCCT GCAATCGCCC TTCGATTATC CGAATAACGC CACGCTCTAC TTACCTAAGA TGAAAACCGA GCCGACGGAC GATGCCTATA CCGCAGAGCT TGCCGAGCAC ATTCTAGAGC TGATTGACGG CGAAATGGCC ACCTTAGTGT TGTTTGCATC TTACTGGCAA ATGGAGAAAG TGGCCGAATT GCTTGAGGGC AAACTCACGC AGGAAATCCT TATTCAAGGA AATGCCCCAC GCCAGCAATT GCTTGAGACC CACAAAGCCA AGTGTGACAA AGGTGAGCCG AGTATTTTGT TCGGCACGGG CAGTTTTTCT GAAGGTCTAG ACTTACCCGG AGATTACCTC ACCAACCTCA TCGTCACTAA GCTGCCCTTT GCGGTGCCGA CATCGCCCGT TGAGCAAGCC CATGCCGAGT ATGTGAAAAT AAAGGGCGGA AATCCGTTTC TGCAACTCAC CATTCCAGAT GCATCGCGAA AGCTTATCCA AAGTTGTGGT AGATTACTGC GTAAAGAGCA GGATTATGGC CGAGTCACTA TCCTTGATAG ACGATTAGTG ACCAAACGTT ACGGCAAATC CTTGCTAGAC GCACTGCCCC CCTTTAGACG AGTCATTGAG TAG
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Protein sequence | MLPDNVKNQI RAIYKDIAAA LPNFRPRREQ NFMVAEISKT LAGDYDKDRR IIVVEAGTGI GKSLSYILGT IPLALASKKK VCIATATVAL QEQLLHKDLP FFLEQSGLNF RFGLVKGRQR YVCLSKLAML IGDDNSTQMA MWQTKPDNSQ IAMLQELLSD FNEGRWNGEI DTLSTPIPDH LWQQIACDKH SCHRQLASHR NCPFHKARED VDTWDVLIAN HSLLFADLEL GGGVILPDPE DVFYVIDEAH HLPIVARDFS SAQATLRGAA DWLEKVGKTS AKLQNQIKSN NIIAPAQAMQ DHIGDLIAQL NQVAHFCDTQ TKQFANPESR YRFEHGKLPD ALKIPAENLA ATSNLALKQF NKMQLLLAEA IKDGDIPKHQ AEALQAEMGF MLQRLENLQK LWKMMAKEDS TKGAPLARWI ELLTGKQVDY LFSASPIEVG FMLESMLWQK AAGVVLCSAT LRALNNFDHF AHQVGLSVKD GSRYLALQSP FDYPNNATLY LPKMKTEPTD DAYTAELAEH ILELIDGEMA TLVLFASYWQ MEKVAELLEG KLTQEILIQG NAPRQQLLET HKAKCDKGEP SILFGTGSFS EGLDLPGDYL TNLIVTKLPF AVPTSPVEQA HAEYVKIKGG NPFLQLTIPD ASRKLIQSCG RLLRKEQDYG RVTILDRRLV TKRYGKSLLD ALPPFRRVIE
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