| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2464 |
|---|
| Symbol | |
|---|
| ID | 4253035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2926773 |
|---|
| End bp | 2927555 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638119096 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734592 |
|---|
| Protein GI | 113970799 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000334634 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000305564 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGG TAAGCAATAG AACAAAAATC GCTACTGCAC TTGTTGGCGT GCTGGCATTA
GCGAGCAGCA ACTTAGTAGT TGCAGATCCT CTTACCGACG TGCAAAAAGC GGATAGTATG
ATCCATGCTG ATGCTGCTGC GTCGCAAAAG AATGTTGATA AGTATTTCGA TCAAGCACAA
GACATGCTCT TTGAGTATGG TTCAGTTGCT GACGAGCGTG AATCACTGAA GTCATATAAC
GATTACGTTG CCAGCTTAGT TGCTGATCAA CAAAAAACAA TGGACGCGAT TCAAAATGAC
ATTAACGGTG TAGATAAACT GCGTCAGGGC GTTGTGCCTT TAATGTTTAA AATGGTTGAG
TCTTTAGAAC AGTTCGTTCA ATTAGATTTA CCATTCAACT CTGAAGTTCG TGCTAACCGC
GTTAAAGAGT TAAAAACACT GTTAAACACA GCTGAAGTGA CTTTGGCTGA AAAATACCGT
TTGATCCTAG ATGCATACAG CATCGAGCGT GAGTACGGTA GTGCTGTTGC AGTTAACCAA
GGTAAATTGA CCTTAGATGG TAAAGAAGTA TTAGTAGACT TCTTTAACTT AGGTCGTGTT
GCTTTATACG CACAGAGCTT AGATCAAAAG ACTGGCTGGA TGTACAACTC TCAAACTAAG
GCTTGGGATA AGTTAGATGA CAGCTATTTG CGTGAACTGA CAAAAGGTAT CCGCATTGCC
CGTAAACAAG GCGCTCTAGA TCTATTCGCG TTACCAATTC CTGCTGCGGA GACTGCACAA
TAA
|
|---|
| Protein sequence | MSKVSNRTKI ATALVGVLAL ASSNLVVADP LTDVQKADSM IHADAAASQK NVDKYFDQAQ
DMLFEYGSVA DERESLKSYN DYVASLVADQ QKTMDAIQND INGVDKLRQG VVPLMFKMVE
SLEQFVQLDL PFNSEVRANR VKELKTLLNT AEVTLAEKYR LILDAYSIER EYGSAVAVNQ
GKLTLDGKEV LVDFFNLGRV ALYAQSLDQK TGWMYNSQTK AWDKLDDSYL RELTKGIRIA
RKQGALDLFA LPIPAAETAQ
|
|---|
| |