| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2459 |
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| Symbol | |
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| ID | 4253030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2922598 |
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| End bp | 2923845 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638119091 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_734587 |
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| Protein GI | 113970794 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.230819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000140637 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAATG CTCATAAAAT CGCAGTTGCG TTATTGCTCT CTCTTTGTGG TGGCGCATTA
TCTGTTTCTT CGGCTGTAGC GGCTGAGAAA TGTGAAATCG ATAAGCGTCA ATCTAAAGCG
GTAGGCGAGA GTGCTGCTAA GAAGGTTCAG AAGTCCTTTG AAGCTTATAC AAATGGCCAG
CTTGATGAAG CTATTGCTAT TTTGTTAGAA GCCAACCCAA AGAACGATTT CGATAAAGCT
TATGTTGCGC GTATGCTCGG TAACTTCTAT GCCGAAAAAG GCAAGATGGA TACCGCGATC
AAATACCTAA AACAAGCAGT TGAGGCTGAT ATTTTAGGTG GTACTGATCA TGCTGCAACA
TTGCGCCTCT ATGCCGACTT ATTGTTACAA GAGAAGAAGT TTAAGGAAGC GATTCCTTAC
TATTACAAGT GGATGGACTT CACTTGTAAG GCTGATTCTC AAATGTATCG TCGTATCGGT
ATTGCTTACA CAGAACTGAA ACAGTGGGAC AAAGTGATTG AAGTGGCTGA TAAAGGCCTT
TCACTTGCTG AGGCTCCTGA TAAAGGTCTG TATCAGATGA AACTGACGTC TTACTTCAAC
CAGAAGAAGT ATAAAAAAGC CGTTGGTGTG TTAGAAGTCA TGGTGCCTTT ATTCCCGGAT
GATGGCAGAT TATGGGTTCA GTTAGCACAG TTTTATCTGA TGGTAGAAGA CTATGATAAG
TCGTTAGCGA CTTATGATTT GGCTTACCGT AATGGTTTCT TGGATACTGG AGCTAACATC
ACTCGTTTAG CTCAGCTGAT GGCTCAAAAA GGTGCGCCAT ATAAAGCAGC TAAAGTATTT
GAGAAAAACA TGAAGTCAGG TCTGATCACA CAGGATGCTA AATCCTATGA GATTTTGGCT
GGTTTCTACC AAAACGCGAA AGAGTTTAAA GAAGCTGCTG AGTTTTACGG AAAAGCGGCT
GCCATCAACA ATGATGGCAA GCTGTATCTG AAACAAGGCC GTTTACTGAG CTTGAATGAG
AAATATGCTG AAGCGATTCC AGTGCTTGAA AAAGCCGTCT CTTTAGGTAT TGACCATCCA
GGTGAAGCAA ACTTCGAATT GGCGTTAGCC CATTTAAGTT TGAAACAGTA CAAGTCTGCT
TATAACCGCG CTGTATTAGC TGCGAAGGAT AAGAAGACTG AGAAGAGTGC AAACAGCTAT
ATCTCTTATA TTAAAGAGAA AGCACGTATG CATAACGTCG AACTGTAA
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| Protein sequence | MRNAHKIAVA LLLSLCGGAL SVSSAVAAEK CEIDKRQSKA VGESAAKKVQ KSFEAYTNGQ
LDEAIAILLE ANPKNDFDKA YVARMLGNFY AEKGKMDTAI KYLKQAVEAD ILGGTDHAAT
LRLYADLLLQ EKKFKEAIPY YYKWMDFTCK ADSQMYRRIG IAYTELKQWD KVIEVADKGL
SLAEAPDKGL YQMKLTSYFN QKKYKKAVGV LEVMVPLFPD DGRLWVQLAQ FYLMVEDYDK
SLATYDLAYR NGFLDTGANI TRLAQLMAQK GAPYKAAKVF EKNMKSGLIT QDAKSYEILA
GFYQNAKEFK EAAEFYGKAA AINNDGKLYL KQGRLLSLNE KYAEAIPVLE KAVSLGIDHP
GEANFELALA HLSLKQYKSA YNRAVLAAKD KKTEKSANSY ISYIKEKARM HNVEL
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