Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2425 |
Symbol | |
ID | 4252996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2888965 |
End bp | 2890137 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119057 |
Product | NnrS family protein |
Protein accession | YP_734553 |
Protein GI | 113970760 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3213] Uncharacterized protein involved in response to NO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.194019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.204544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATA TTGATGAACC CGCACACCTA CAGCCTAAAG TGGCCTTGTT CCGCTTAGGT TTTAGACCCT TTTTCCTGTT TGCCAGTCTA TTTAGCCTAT TGAGTTTAAG CATATGGGGC GGCTTACTTT CAGGTAAGTT GTTACTCCCA AACACACTCA ATCCACTCTG GTGGCATGGC CACGAAATGA TTTTTGGTTT TGTCTGCGCC GTCGTGGCAG GCTTTTTACT GACTGCTGTG CAAAACTGGA CCGGGCGCCC CGGTGTTAAG GGTTTGCCCT TGGCGGGACT ATTTATGGTG TGGCTGCTTC CAAGGTTGTT GCTTATTTTG CCCTTCAACA TTCCGCTTGC CGTCATCATG GCTATAGATC TGCTGTTTTT ACCGCTTACT GCCACCTTGT TAGCCATTTC GGTGATAGAG GTTCGCCAGT GGCGCAACTT TGTGTTTATC CCCATTCTGG GTTTACTCAC TATATTCAAT GGGATGAGCT ATTACGGTTT AACCACCAAC CAATTGAATT GGATGAATAA TGGGCTTTAT GCAGCAGTAA TACTCCTTGC CGTGATTGTT GCGCTGCTCG GTGGACGGGT GATCCCATTT TTTACTGAAC GTGCAACAAA CTGGCAGAAG CAAACGCCTA TTGCTGCCGT TGAATTGTTA AGTTTTGCGA GCCTGTTGGC ACTCGTCGTA AGCCTCTTTT TAGTTGACAC CTTGTTGACC CGAATCCTTG CGGGTATCGC AGGCTTAGTG CTGTTATTTC GCTGGTCTCG TTGGGGATGG CGCGCGAGCT GGTCTGTGCC ACTGCTATGG TCGCTGCATT TAAGTTATTT ATGTATTCCG ATAGGGTTGA TGCTCATTGC TGCCGGATTA CCACTTTCCG TCGGCATGCA TGCCATTACC GTGGGTGGAC TTGGTGGGAT GATCTTAGCG ATGATGTCAC GGGTATCACT CGGGCATACG GGGCGCTCCC TTACACCGCC GCGCCCGATG GCACTGGCTT TTGCCTTGAT CCTCTTAGCG ACTGTGCTTC GCGTTTTAGC AGGCTTACTC AGTGCCTGGT TTATCGAACT CATGCTCGCT GCAATTGGGT TTTGGATCTT GGCCTTTGGT TGTTTCTGCT ACTGCTATGC ACCTATGCTT TGCCGAGTGC GGGTCGATGG TCGCCCAGGT TAG
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Protein sequence | MLNIDEPAHL QPKVALFRLG FRPFFLFASL FSLLSLSIWG GLLSGKLLLP NTLNPLWWHG HEMIFGFVCA VVAGFLLTAV QNWTGRPGVK GLPLAGLFMV WLLPRLLLIL PFNIPLAVIM AIDLLFLPLT ATLLAISVIE VRQWRNFVFI PILGLLTIFN GMSYYGLTTN QLNWMNNGLY AAVILLAVIV ALLGGRVIPF FTERATNWQK QTPIAAVELL SFASLLALVV SLFLVDTLLT RILAGIAGLV LLFRWSRWGW RASWSVPLLW SLHLSYLCIP IGLMLIAAGL PLSVGMHAIT VGGLGGMILA MMSRVSLGHT GRSLTPPRPM ALAFALILLA TVLRVLAGLL SAWFIELMLA AIGFWILAFG CFCYCYAPML CRVRVDGRPG
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