| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2394 |
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| Symbol | |
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| ID | 4252965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2854926 |
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| End bp | 2856164 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119026 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] synthase II |
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| Protein accession | YP_734522 |
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| Protein GI | 113970729 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000633865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTAAAC GTCGTGTAGT GGTAACCGGT TTAGGGTTAG TAACGCCCGT GGGCAATACT
GTCGACACTA CTTGGAAAGC CCTGCTTTCG GGTAAGAGTG GTATTGCACC TATAACCAAA
TTTGATGCCA GCGAATTCAC CACTCGTTTC AGTGGTTCTG TAAAAGATTT CGATGTCGAG
CAGTACTTAA CCAAAAAAGA CGCCCGTAAA ATGGACCTCT TTATTCAATA TGGTATGGCT
GCGGGCATCC AAGCTATCCA AGACTCGGGT CTGGATATGA GCAAAGTAAA CCCAGGCCGC
GTCGGTACCG CTATTGGTGC GGGCATGGGG GGCATGTGGT TGATTGAACA AAACCATAGC
GCGTTATTAA GTGGTGGCCC TCGTAAAATT TCACCTTTCT TCGTGCCAAG TACCATCATC
AACATGATCG CCGGCCATTT ATCGATTATG TACGGTATGA CTGGCCCTAA CTTTGCCGTC
ACGACCGCTT GTACTACTGG TGTGCACAAC ATCGGTTTTG CGGCGCGCAC CATTGCCTAT
GGCGATGCCG ATGTGATGAT CGCCGGCGGC GCCGAAGATG TGACTTGTCC ATTAGGCGTA
GGTGGTTTTG GCGCAGCTAA AGCGCTGTCA ACCCGTAACG ATGACCCAAC GGCGGCTAGC
CGTCCGTGGG ACAAAGACCG TGATGGTTTC GTCATCGGTG ATGGCGCGGG TGTGATGGTG
ATGGAAGAAT ACGAGCATGC TAAGGCGCGC GGTGCGACCA TTTATGGCGA ACTTGTTGGC
TTTGGTATGA GCGGTGATGC GTTCCACATG ACATCGCCAC CAAGCGATGG TGCGGGCGCT
GCGGCGGCTA TGGTTAATGC GGTGAATGAT GCCAAGCTGC CATTTGAAAA AATTGGTTAT
ATCAATGCGC ACGGTACTTC AACGCCAGCG GGCGATAAAG CCGAAGCAGC AGCGGTGAAA
TCAGTATTTG GCGACCACGC TTATAATCTG CTAGTTAGTT CGACTAAGTC TATGACGGGT
CACTTGCTGG GCGCTGCGGG TGCGGTTGAA GCGATTTTCA CTTTGCTTGC GCTGCGCGAT
CAAGCCGTAC CGCCGACCAT CAACCTCGAT AATCCAGACG AAGGTTGTGA TTTAGACTTC
GTGGCACACA CTGCCCGCGA TGTGAAGTTA GAGTATGCTC TGTGTAACTC CTTCGGTTTT
GGTGGCACTA ACGGTTCATT GCTGTTTAAG AAAGTCTAA
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| Protein sequence | MSKRRVVVTG LGLVTPVGNT VDTTWKALLS GKSGIAPITK FDASEFTTRF SGSVKDFDVE
QYLTKKDARK MDLFIQYGMA AGIQAIQDSG LDMSKVNPGR VGTAIGAGMG GMWLIEQNHS
ALLSGGPRKI SPFFVPSTII NMIAGHLSIM YGMTGPNFAV TTACTTGVHN IGFAARTIAY
GDADVMIAGG AEDVTCPLGV GGFGAAKALS TRNDDPTAAS RPWDKDRDGF VIGDGAGVMV
MEEYEHAKAR GATIYGELVG FGMSGDAFHM TSPPSDGAGA AAAMVNAVND AKLPFEKIGY
INAHGTSTPA GDKAEAAAVK SVFGDHAYNL LVSSTKSMTG HLLGAAGAVE AIFTLLALRD
QAVPPTINLD NPDEGCDLDF VAHTARDVKL EYALCNSFGF GGTNGSLLFK KV
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