| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2360 |
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| Symbol | |
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| ID | 4252931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2811528 |
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| End bp | 2812892 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638118985 |
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| Product | aminotransferase |
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| Protein accession | YP_734488 |
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| Protein GI | 113970695 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00043743 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAATT TACTCGATTT GGATTTTGAT TTTGATAGCG CCCATATTTG GCATCCTTAT
ACTTCAATGA CCCGCGCACT TCCTGTTTTT GGGGTACACA GTGCCCAAGG CTGCGAGCTG
GAATTGGTCG ATGGCCGTAA GCTTATCGAT GGCACTAGCT CCTGGTGGGC CTGCGTGCAT
GGCTACGGAC ACCCGGCGAT ATTAACGGCG ATGGAGCGGC AACTGCAGCA ACTCAGCCAT
GTCATGTTTG GCGGCATTAC CCATGAGCCC GCCATTACAC TCTGCAAAAA ACTGCTGGCG
ATGACCTGCG AGCCCCTCAC TAAAGTCTTT CTGTGCGACT CAGGCTCGAT TGCCGTTGAA
GTTGCCATCA AAATGGCGCT GCAATATTGG CAGGGGCAAG ATTTGCCTTT AGTGCAAAAG
GCCCAAAAAC AACGCATTCT CACGGTGAAG AAGGGATACC ATGGCGATAC CTTTGCCGCC
ATGAGTGTCT GCGATCCCGA AGGGGGTATG CATACCATGT TTGGCGAGGC TGTAACGAAA
CAGTGTTTTG TCGACGCGCC GCAAACGCCC TTCGGCGAGC CATTAAGCCA AGATGATTTA
GCGCCAATGC AACGTATTTT ACGCGAGCAA CATCAAGAGA TTGCCGCCGT GATTATCGAG
CCGATTATGC AGGGTGCAGG GGGAATGCGA TTCTACAGCA GCGACTATTT ACGCGGCCTG
CGTGCCCTGT GTGATGAATA TAATGTGCTG CTTATCCTCG ATGAAATCGC TACGGGTTTT
GGCCGAACCG GTAAGTTATT TGCCTATGAA CATGCCGATA TCACGCCCGA CATACTCTGC
CTAGGCAAAG CGTTAACGGG GGGTTATATC AGCCTTGCCG CCACCTTGTG CACAGATAAC
GTCGCCCAAG GCATTAGCCA ATCGCCCGCA GGCGTCTTTA TGCACGGCCC AACATTTATG
GGCAATCCCC TCGCCTGCGC TGCCGCCTGC GCAAGCTTAG ATCTGATCAA TCAACAGGAG
TGGCCAGCGC AGGTTGCCGC CATCGAACAG CAAATGCAGC GCGAGCTTGC CGATGCCAAT
GATATTCCCA GCGTGAAAGA GGTGCGCGTG CTCGGCGCCG TCGGCGTGCT CGAAATGCAC
CAAGCGGTCA ATACCGCGGC GCTGCAGCAG CAATTTGTCG ACTTAGGCGT ATGGGTTCGC
CCCTTTGCCA ACCTAATTTA TATTATGCCG CCCTATGTGA TAACCCCAGC GCAACTGACA
CAACTGACTC GGGCGATGAA GCAAGTGGCA GCGACGATTA CGCCGCCACA GGCCGCTCAA
ACCGAGGCGC TTGCGAATGA AAGCATCACC ATCAGCCATG GTTAA
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| Protein sequence | MRNLLDLDFD FDSAHIWHPY TSMTRALPVF GVHSAQGCEL ELVDGRKLID GTSSWWACVH
GYGHPAILTA MERQLQQLSH VMFGGITHEP AITLCKKLLA MTCEPLTKVF LCDSGSIAVE
VAIKMALQYW QGQDLPLVQK AQKQRILTVK KGYHGDTFAA MSVCDPEGGM HTMFGEAVTK
QCFVDAPQTP FGEPLSQDDL APMQRILREQ HQEIAAVIIE PIMQGAGGMR FYSSDYLRGL
RALCDEYNVL LILDEIATGF GRTGKLFAYE HADITPDILC LGKALTGGYI SLAATLCTDN
VAQGISQSPA GVFMHGPTFM GNPLACAAAC ASLDLINQQE WPAQVAAIEQ QMQRELADAN
DIPSVKEVRV LGAVGVLEMH QAVNTAALQQ QFVDLGVWVR PFANLIYIMP PYVITPAQLT
QLTRAMKQVA ATITPPQAAQ TEALANESIT ISHG
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