| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2338 |
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| Symbol | |
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| ID | 4252909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2788478 |
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| End bp | 2789560 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118963 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_734466 |
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| Protein GI | 113970673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00136978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000141161 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATAATTAT CATCGCTATT TTGGCTGCGG GCTGGTTTGG ATACCAAAGT
ATGCAACCCC AAGCTCCGCA GAAAGCTAAT GTTAAGCTCA CCCCTAATGT GGTCATCGCG
ACTGCCGCTA TGGCGCCTGT GCGTGACGAA GTTGAAGCCA TAGGCACCAA CAAGGCCTAT
GAGTCTGTCA CTATCACGCC TAAAGTCACC GATGTGGTCA CCTCACTCAA ATTTGATGAT
GGAGATATCG TTAAGAAGGG CGACTTATTG GTGCAACTGC AAAATGCCGA GCAGATAGCC
AAAGTGAAAG TGGCGCAGGT GAAGGTGAGT GATAATCAAC GCGAGTTAGC GCGGATCAGC
TCTCTGGTGA CCAGTCGCAC TGTGGCAGAG TTAGAGCGTG ACCGCCTGCA AACTTTAATC
GATACCACCC GTGCCGAGTT AGAGCAGGCA CAATCATCCC TGAATGATCG CAGCATAGTT
GCGCCCTTTA ATGGTCGTTT AGGCCTGCGC CAAGTGAGTG TGGGTAGCCT AGTGACTCCG
GGTACTGAGA TCACCACACT CGATGATATC TCTAAGATTA AATTAGACTT TTCGGTGCCT
GAGCGCTTTA TTCAAGACTT ACAGCCCGGC AAACAAGTCG AAGCCAAAGC CGTAGCGTTT
CCCGATGAAA TCTTTAAAGG CAAAGTGATT TCTATCGATA GCCGCGTTAA TCCAACCACT
CGCGCCGTGA TTGTGCGCGC CGAAATCCCA AATCCAGATT TACGTTTACT GCCCGGCATG
CTGATGAAGG TGAAACTCAT CAAGCGCAGC CGTGAGGCCT TGATGTTGCC TGAGTCGGCG
ATTATCCCAA TCCAAAAAGA GCACTTTGTT TACAGCGTCA ATAAGGACAA TGTGATTGAG
CGTAAGCAAG TCACCATTGG TATTCGTACC CGCGGCTGGG TCGAAATCCT CGGTGGTTTA
GAGATTGGTG AAAATGTGGT GATCCGCGGG CTACTCAAAG TGCACCCAGG CGATGTGGTC
AAAACCGAAT TGGCTGAGAA GTTTAGCTAT CTTTCCGATG CTAATGCGGA GCCAAGTGTA
TGA
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| Protein sequence | MKKIIIIIAI LAAGWFGYQS MQPQAPQKAN VKLTPNVVIA TAAMAPVRDE VEAIGTNKAY
ESVTITPKVT DVVTSLKFDD GDIVKKGDLL VQLQNAEQIA KVKVAQVKVS DNQRELARIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QSSLNDRSIV APFNGRLGLR QVSVGSLVTP
GTEITTLDDI SKIKLDFSVP ERFIQDLQPG KQVEAKAVAF PDEIFKGKVI SIDSRVNPTT
RAVIVRAEIP NPDLRLLPGM LMKVKLIKRS REALMLPESA IIPIQKEHFV YSVNKDNVIE
RKQVTIGIRT RGWVEILGGL EIGENVVIRG LLKVHPGDVV KTELAEKFSY LSDANAEPSV
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