Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2319 |
Symbol | |
ID | 4252890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2764999 |
End bp | 2766906 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118944 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_734447 |
Protein GI | 113970654 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATG TTGGACAACA ATTACATCAG ACATCTATTG CGAATAAACA GGCATTTTGG CAACAAGCGG CCAAGGCCTT AGACTGGGTT ACGCCGAGCA AACAAATATT AGATGAAAGC GAGGCACCGT TTTATCACTG GTTTAGCGAT GGCGAGTTAA ACACTTGCTA CAACGCGGTG GATAGGCATG TTTTGGCGGG GCGCGGTGAT CAGATTGCTC TTCATTATGT TAGCCCTGTG ACTGAAACCG AATACAGCAT TACTTACCGT GAGTTACTGG CCCAAGTGGC AAGGCTTGCG GGCTATTTGC AAAGCGTTGG CGTGACTAAG GGAGACCGCG TGGTCATCTA CATGCCCATG GTGCCCGAGA CCGCCTATGC GATGCTTGCC TGCGCGCGAA TTGGCGCTAT TCATTCGGTG GTCTTCGGTG GCTTTGCGGC CAATGAGCTG GCGACCCGTA TCAATGATGC CAAACCAAAA TTGGTGATGT CTGCCTCCTG CGGGATTGAG CCTTCAGGCG TTGTGCCCTA TAAACCCTTA CTAGATAAAG CATTAAATGA AGCAACGCAC AAGGTTGAGC ATTGCTTGAT TTTAAATCGC CCCCAATATG AGGCGCAGAT GCAAGCGGGG CGCGATAAGG ACTGGCAAAC AGCCTTAAGC GCTAGCAACA ATGCCGATTG TGTGACGGTG AAAGCCACCG ATCCCCTGTA TGTGCTTTAT ACCTCGGGGA CCACGGGTCA ACCCAAAGGC GTGGTGCGGG ATAATGGCGG CCATGCGGTG GCATTGGCTT GGTCCATGGC CAATATTTAC GATATTGCCC AAGGGGATGT ATTTTGGGCG GCATCGGATG TGGGCTGGGT GGTGGGACAC TCCTATATTG TCTATGGTCC GCTACTTGTC GGGGCGACGA CCTTGTTATA TGAAGGTAAA CCCGTAGGTA CGCCAGACCC AGGTGCCTTT TGGCGCACAA TTGCAAAGTA TCGAGTCAAA AGCTTTTTCA CCGCGCCCAC GGCGATCCGC GCCATTAAGC GCGAAGATCC CGACGGCGAA TTTATCCAAG GTGTCGATTT AAGCTGCTTG AAGAATGTCT TTTTGGCTGG GGAGCGCTGT GATCCCGATA CCTTACATTG GGCCGAAGCC AAACTGAATA AACCGGTTAT CGACCATTGG TGGCAAACTG AAACGGGCTG GCCAGTGGCG GCAAACCTGA TGGGTGTGGC ACCGATTGCC GTTAAAGCGG GATCGCCCGG TCGACCCGTC CCAGGATATG AGGTCGATGT GGTCGATGAG ATGGGCGCCA AAGTGGCGGC GAATGTCTCT GGTAATGTGG TCATCAAATT GCCGCTGCCA CCGGGCACGC TCACTACACT CTGGCAAAAT AATAAACGCT ATCAAGATAG TTACTTATCT ATGTACCCAG GTTATTACCT CACTGGGGAT GCGGGTTATA TGGATGAAGA TGGTTATCTG TATATCATGA GCCGTATCGA TGACATTATT AACGTAGCGG GCCATCGACT CTCCACCGGG CGGTTTGAAG AGGTTTTGTG TCAGCATCCC GATGTGGCCG AAGCGGCCGT GATTGGTGTC GACGATAAAC TCAAAGGCCA AGTGCCCTTG GGCTTAGTGG TGCTGAAAAA GGGCGTGACC ATTACGGACG AGGAGCTGCA TAAGCAGTTA ATTGCCCTCG TTCGCCAAGA AATTGGTCCC GTCGCGTCCT TTAGGTTGGT GAGTGCGATT CAAAAGCTGC CAAAAACCCG CTCGGGTAAA ATCCTGCGCG GCACTATGCG TAAAATTGCC GATAATCAGC AATATACGGC GCCAGCGACC ATTGAAGATC CGCAGACCCT CGATTTAGTC CGCACGACCT TAACCCGCAT GGGTTATGCC GATGCTCTCG TGGGGTAA
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Protein sequence | MTDVGQQLHQ TSIANKQAFW QQAAKALDWV TPSKQILDES EAPFYHWFSD GELNTCYNAV DRHVLAGRGD QIALHYVSPV TETEYSITYR ELLAQVARLA GYLQSVGVTK GDRVVIYMPM VPETAYAMLA CARIGAIHSV VFGGFAANEL ATRINDAKPK LVMSASCGIE PSGVVPYKPL LDKALNEATH KVEHCLILNR PQYEAQMQAG RDKDWQTALS ASNNADCVTV KATDPLYVLY TSGTTGQPKG VVRDNGGHAV ALAWSMANIY DIAQGDVFWA ASDVGWVVGH SYIVYGPLLV GATTLLYEGK PVGTPDPGAF WRTIAKYRVK SFFTAPTAIR AIKREDPDGE FIQGVDLSCL KNVFLAGERC DPDTLHWAEA KLNKPVIDHW WQTETGWPVA ANLMGVAPIA VKAGSPGRPV PGYEVDVVDE MGAKVAANVS GNVVIKLPLP PGTLTTLWQN NKRYQDSYLS MYPGYYLTGD AGYMDEDGYL YIMSRIDDII NVAGHRLSTG RFEEVLCQHP DVAEAAVIGV DDKLKGQVPL GLVVLKKGVT ITDEELHKQL IALVRQEIGP VASFRLVSAI QKLPKTRSGK ILRGTMRKIA DNQQYTAPAT IEDPQTLDLV RTTLTRMGYA DALVG
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